BLASTX nr result

ID: Atractylodes21_contig00021452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021452
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314470.1| chromatin remodeling complex subunit [Populu...    99   4e-19
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...    98   6e-19
emb|CBI26124.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]    92   6e-17
ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arab...    77   1e-12

>ref|XP_002314470.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222863510|gb|EEF00641.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 242

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 61/141 (43%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   AMETVINRHGLDIEALMASRQPLTSGTQAGDSSLSQVAGPSQQAAVENDSKKSLTTEDTA 181
           AMETVIN+HGLDIEAL +SR PLT GTQ GDSS +Q  G SQ   V  DSK  L   + +
Sbjct: 60  AMETVINQHGLDIEALRSSRLPLTGGTQMGDSSTAQYGGSSQAVGVGKDSKAGLAENEIS 119

Query: 182 KV-ATFSSKALHGPGGAGHDIYQGSANQLNSIKSHGVDAGFSGSYESAEPGNPISLQFSN 358
           KV  + SS+   GP  AGHD YQGS  Q +   S   D     S E+    +    + +N
Sbjct: 120 KVDPSASSRPPAGPSSAGHDYYQGSGTQRS---SQSFDHESPSSLETRSANSQSQERGAN 176

Query: 359 SYDNQSAATLMHKGPAGKALE 421
             D + A     +G +   LE
Sbjct: 177 QKDGKKAVAKRKRGDSSLHLE 197


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851625|gb|EEE89172.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 3427

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = +2

Query: 5   METVINRHGLDIEALMASRQPLTSGTQAGDSSLSQVAGPSQQAAVENDSKKSLTTEDTAK 184
           METVIN+HGLDIEAL +SR PLTSGTQ GDSS +Q  G SQ   V  DSK      + +K
Sbjct: 1   METVINQHGLDIEALRSSRLPLTSGTQMGDSSTAQYGGSSQAVGVGKDSKAGSAENEISK 60

Query: 185 VATF-SSKALHGPGGAGHDIYQGSANQLNS 271
           + TF SS+   GPG AGHD YQGS  Q +S
Sbjct: 61  IDTFASSRPPVGPGTAGHDYYQGSGTQRSS 90


>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   AMETVINRHGLDIEALMASRQPLTSGTQAGDSSLSQVAGPSQQAAVENDSKKSLTTEDTA 181
           AMETVIN+HGLDIEAL +SR P + GT  GDSS +++AG S  A V  D++  L   + A
Sbjct: 57  AMETVINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMA 116

Query: 182 KVATF-SSKALHGPGGAGHDIYQGSANQLNSIKS 280
           K+  F SS+   GP  AGHDIYQGS +  +  KS
Sbjct: 117 KIDAFASSRPPVGPSSAGHDIYQGSVSHKSGGKS 150


>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
          Length = 771

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   AMETVINRHGLDIEALMASRQPLTSGTQAGDSSLSQVAGPSQQAAVENDSKKSLTTEDTA 181
           AMETVIN+HGLDIEAL +SR P + GT  GDSS +++AG S  A V  D++  L   + A
Sbjct: 57  AMETVINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMA 116

Query: 182 KVATF-SSKALHGPGGAGHDIYQGSANQLNSIKS 280
           K+  F SS+   GP  AGHDIYQGS +  +  KS
Sbjct: 117 KIDAFASSRPPVGPSSAGHDIYQGSVSHKSGGKS 150


>ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp.
           lyrata] gi|297326777|gb|EFH57197.1| hypothetical protein
           ARALYDRAFT_481680 [Arabidopsis lyrata subsp. lyrata]
          Length = 3451

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   AMETVINRHGLDIEALMASRQPLTSGTQAGDSSLSQVAGPSQQAAVENDSKKSLTTEDTA 181
           AM+TV+N+HGLDIEAL +S  P   GTQ  DS  + +AG SQ   V N+ K SL   + +
Sbjct: 57  AMDTVVNQHGLDIEALKSSCLPHAGGTQTEDSGSAHLAGSSQAVGVSNEGKASLVENEMS 116

Query: 182 KVATFSS-KALHGPGGAGHDIYQGSANQLN 268
           K  TF+S + L G   A    YQGS  Q N
Sbjct: 117 KYDTFTSGRQLGGSNSASQTFYQGSGTQSN 146


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