BLASTX nr result

ID: Atractylodes21_contig00021401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021401
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   236   3e-60
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   219   4e-55
ref|XP_002510115.1| transcription initiation factor, putative [R...   185   7e-45
ref|XP_002520510.1| transcription initiation factor, putative [R...   179   6e-43
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...   175   7e-42

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  236 bits (603), Expect = 3e-60
 Identities = 139/244 (56%), Positives = 178/244 (72%), Gaps = 12/244 (4%)
 Frame = +2

Query: 5    QMRQGAVHPSMGASQVGISTQAMNPMNLP--DRQAAFSDMKRMHGGNLTHFPSNSALQQN 178
            QMRQ  +H ++G++Q+G ++QAMNPM++P  +RQ++ +D KR+ GG+L H  ++S LQQ+
Sbjct: 399  QMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQS 458

Query: 179  SGHWQQSMHKDQSLLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSALSG 358
            S  WQ S +K+Q  +SSMAYVK EP DQ N+QQ +SQLST Q  SSF   Q+E+G+A+ G
Sbjct: 459  SVPWQSSTNKEQ--ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPG 516

Query: 359  SSKDESFEMLSSRPNFSTSMSKPEPMSITAQLERQ---NVSAAN--SSLVS--GSNAKTP 517
              KDES E  +SR  FS+SMS   P S+++ +      NV+  +   S+ S  G N +TP
Sbjct: 517  ILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTP 576

Query: 518  PKKPSVGQKKPLEAPVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFS 688
            PKKPS+GQKKPLEA  SS    SKKQKVSGAF DQSIEQLNDVTAVSGVNLREEEEQLFS
Sbjct: 577  PKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFS 636

Query: 689  GSKE 700
            G KE
Sbjct: 637  GPKE 640


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  219 bits (558), Expect = 4e-55
 Identities = 131/238 (55%), Positives = 171/238 (71%), Gaps = 12/238 (5%)
 Frame = +2

Query: 5    QMRQGAVHPSMGASQVGISTQAMNPMNLP--DRQAAFSDMKRMHGGNLTHFPSNSALQQN 178
            QMRQ  +H ++G++Q+G ++QAMNPM++P  +RQ++ +D KR+ GG+L H  ++S LQQ+
Sbjct: 444  QMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQS 503

Query: 179  SGHWQQSMHKDQSLLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSALSG 358
            S  WQ S +K+Q  +SSMAYVK EP DQ N+QQ +SQLST Q  SSF   Q+E+G+A+ G
Sbjct: 504  SVPWQSSTNKEQ--ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPG 561

Query: 359  SSKDESFEMLSSRPNFSTSMSKPEPMSITAQLERQ---NVSAAN--SSLVS--GSNAKTP 517
              KDES E  +SR  FS+SMS   P S+++ +      NV+  +   S+ S  G N +TP
Sbjct: 562  ILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTP 621

Query: 518  PKKPSVGQKKPLEAPVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQL 682
            PKKPS+GQKKPLEA  SS    SKKQKVSGAF DQSIEQLNDVTAVSGVNLR  EE+L
Sbjct: 622  PKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVNLRCVEERL 679


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score =  185 bits (470), Expect = 7e-45
 Identities = 121/247 (48%), Positives = 161/247 (65%), Gaps = 14/247 (5%)
 Frame = +2

Query: 2    LQMRQGAVHPSMGASQVGISTQAMNPMNLP--DRQAAFSDMKRMHGGNLTHFPSNSALQQ 175
            LQMRQ + H +M ++Q+G ST  +N +++   +R  + SD  R+  G+++ + + SAL Q
Sbjct: 397  LQMRQIS-HSTMASTQIGGSTPTLNMVHVSKFERPNSVSDPSRVQSGSMSQYNNKSALPQ 455

Query: 176  NSGHWQQSMHKDQS--LLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSA 349
            NS  WQ   +K+Q+  L  S  YVK EP++Q  DQQ + QLS  QG S+ +PG  EQG+A
Sbjct: 456  NSIPWQAPTNKEQTSPLFPSTNYVKQEPLEQATDQQQKPQLSNPQGLSA-APG--EQGNA 512

Query: 350  LSGSSKDESFEMLSSRPNFSTSMSKPEPMSITAQLERQ---NVSAA----NSSLVSGSNA 508
            +  +SK++S E  SS+  FS   +     S++  +  Q   N+ A     + +   G NA
Sbjct: 513  VPVNSKEDSLEKPSSKVGFSNPSTAVPSNSVSPSIAIQPDPNIQAGPRFPSGAASVGVNA 572

Query: 509  KTPPKKPSVGQKKPLEAPVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQ 679
            +TP KK S+GQKKPLEA  SS    SKKQKVSGAF DQSIEQLNDVTAVSGVNLREEEEQ
Sbjct: 573  RTPTKKLSIGQKKPLEALGSSPPMSSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQ 632

Query: 680  LFSGSKE 700
            LFSGSKE
Sbjct: 633  LFSGSKE 639


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
            gi|223540352|gb|EEF41923.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 927

 Score =  179 bits (453), Expect = 6e-43
 Identities = 115/247 (46%), Positives = 153/247 (61%), Gaps = 14/247 (5%)
 Frame = +2

Query: 2    LQMRQGAVHPSMGASQVGISTQAMNPMNLP--DRQAAFSDMKRMHGGNLTHFPSNSALQQ 175
            LQMR+ + HP+ GA+Q+G S QAM+ + +   +R  + +D  ++  G+   + + SALQ 
Sbjct: 364  LQMRKIS-HPTTGATQIGGSAQAMDMIKVSKFERPNSGTDPNKVQSGSAAQYTNKSALQP 422

Query: 176  NSGHWQQSMHKDQ--SLLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSA 349
            NS  WQ   +K+Q  S   S  YVK EPV+Q  +Q  +SQLS    P   S   +EQG+A
Sbjct: 423  NSAPWQPPTNKEQKSSPFPSKNYVKQEPVEQATEQHQKSQLSN---PQDLSAAPVEQGNA 479

Query: 350  LSGSSKDESFEMLSSRPNFSTSMSKPEPMSITAQLERQ-----NVSAANSSLVS--GSNA 508
            ++ + K +S E  SS+   S   S     S++  +  +      V +   S+ +  G NA
Sbjct: 480  VTSNLKVDSLEKQSSKVGISIPSSMVPSSSVSTSIATRLDPIIQVGSQIQSIAASPGVNA 539

Query: 509  KTPPKKPSVGQKKPLEAPVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQ 679
            +TPPKKP +GQKKPLEA  SS    SKKQK+S A SDQSIEQLNDVTAVSGVNLREEEEQ
Sbjct: 540  RTPPKKPLIGQKKPLEALGSSPPMSSKKQKISVASSDQSIEQLNDVTAVSGVNLREEEEQ 599

Query: 680  LFSGSKE 700
            LFSGSKE
Sbjct: 600  LFSGSKE 606


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score =  175 bits (444), Expect = 7e-42
 Identities = 109/240 (45%), Positives = 144/240 (60%), Gaps = 8/240 (3%)
 Frame = +2

Query: 5    QMRQGAVHPSMGASQVGISTQAMNPMNLPDRQAAFSDMKRMHGGNLTHFPSNSALQQNSG 184
            Q RQ   H ++G +Q+G    +M      +RQ +  D  R+H G+++H+ + SALQQNS 
Sbjct: 371  QTRQIPHHQNLGVTQIGGPMHSMISTPKFERQNSADDPSRVHSGSVSHYTNKSALQQNSA 430

Query: 185  HWQQSMHKDQS--LLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSALSG 358
             WQ   ++++S    SS+ YVKP  ++Q  +QQ++ QLS                     
Sbjct: 431  PWQAPSNREKSPASFSSLNYVKPGLLEQAGEQQNKPQLS--------------------- 469

Query: 359  SSKDESFEMLSSRPNFSTSMSKPEPMSITAQLERQNVSAANSSLV---SGSNAKTPPKKP 529
            S +D+S +  S++  FST      P SI  Q++    + +  S V   +G NA+TPPKKP
Sbjct: 470  SPQDQSLDKQSTKIVFSTVPPNSAPPSIATQMDPNGQAGSRISSVASPAGVNARTPPKKP 529

Query: 530  SVGQKKPLEAPVSS---LSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKE 700
            SVGQKKP EA  SS    +KK KVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSG KE
Sbjct: 530  SVGQKKPFEALGSSPPASTKKHKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKE 589


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