BLASTX nr result

ID: Atractylodes21_contig00021396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021396
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   132   2e-29
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002308603.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_003552384.1| PREDICTED: exosome complex exonuclease RRP46...   121   7e-26

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/96 (62%), Positives = 82/96 (85%)
 Frame = -1

Query: 476 SGHILLDPSKIEEQRVKAFVYLVFPNSMVSVLPQGSLRPGGEVMEHGIITSVTHGVMAVD 297
           SG+++LDP+K+EEQ++KAF YLVFPNS +S++P+GS    GE+MEHGIITSVTHGVM+VD
Sbjct: 150 SGYVILDPTKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTHGVMSVD 209

Query: 296 DYFSCLKLGRAAAAELSDFLRSSLKSKSGNDPSKAG 189
           DY  CL+ G+AA+ ++S FLR SL+S++ ND S+AG
Sbjct: 210 DYLHCLERGQAASTKMSAFLRRSLQSQAPNDSSRAG 245


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/96 (62%), Positives = 82/96 (85%)
 Frame = -1

Query: 476 SGHILLDPSKIEEQRVKAFVYLVFPNSMVSVLPQGSLRPGGEVMEHGIITSVTHGVMAVD 297
           SG+++LDP+K+EEQ++KAF YLVFPNS +S++P+GS    GE+MEHGIITSVTHGVM+VD
Sbjct: 148 SGYVILDPTKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTHGVMSVD 207

Query: 296 DYFSCLKLGRAAAAELSDFLRSSLKSKSGNDPSKAG 189
           DY  CL+ G+AA+ ++S FLR SL+S++ ND S+AG
Sbjct: 208 DYLHCLERGQAASTKMSAFLRRSLQSQAPNDSSRAG 243


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/94 (63%), Positives = 79/94 (84%)
 Frame = -1

Query: 473 GHILLDPSKIEEQRVKAFVYLVFPNSMVSVLPQGSLRPGGEVMEHGIITSVTHGVMAVDD 294
           G+++LDP+K+EEQ+++ F YLVFPNS+VSVLP+GS    GE MEHGIITSVTHGVM+V++
Sbjct: 149 GYVILDPTKLEEQKMRGFTYLVFPNSVVSVLPEGSSHVEGEPMEHGIITSVTHGVMSVEE 208

Query: 293 YFSCLKLGRAAAAELSDFLRSSLKSKSGNDPSKA 192
           Y  CL+ GRAA+ +LSDFLR SL+S+  +D SKA
Sbjct: 209 YLKCLERGRAASTKLSDFLRRSLQSQLPSDSSKA 242


>ref|XP_002308603.1| predicted protein [Populus trichocarpa] gi|222854579|gb|EEE92126.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/94 (61%), Positives = 77/94 (81%)
 Frame = -1

Query: 473 GHILLDPSKIEEQRVKAFVYLVFPNSMVSVLPQGSLRPGGEVMEHGIITSVTHGVMAVDD 294
           G+++LDP+K+EEQ++K F YLVFPNS++SVL +GS    GE  EHGIITSVTHGVM V++
Sbjct: 149 GYVILDPTKLEEQKMKGFAYLVFPNSVLSVLLEGSSLVEGESTEHGIITSVTHGVMPVEE 208

Query: 293 YFSCLKLGRAAAAELSDFLRSSLKSKSGNDPSKA 192
           Y  C++ GRAA+A+LSDFLR SL+S+  +D SKA
Sbjct: 209 YLKCVERGRAASAKLSDFLRKSLQSQLSSDSSKA 242


>ref|XP_003552384.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Glycine max]
          Length = 243

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/96 (59%), Positives = 79/96 (82%)
 Frame = -1

Query: 476 SGHILLDPSKIEEQRVKAFVYLVFPNSMVSVLPQGSLRPGGEVMEHGIITSVTHGVMAVD 297
           SG I+LDP+K EE+++KAF+ LVFPN++VSVLP+GSL+ G E M HGI+TS+T G M+VD
Sbjct: 148 SGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVD 207

Query: 296 DYFSCLKLGRAAAAELSDFLRSSLKSKSGNDPSKAG 189
           DY  CL+ GRAA+A LS+F+R +++ KS ++ SKAG
Sbjct: 208 DYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG 243


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