BLASTX nr result

ID: Atractylodes21_contig00021377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021377
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU23806.1| unknown [Glycine max]                                  132   7e-29
ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like...   131   1e-28
ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like...   130   2e-28
ref|XP_002312167.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28
gb|AFK39456.1| unknown [Medicago truncatula]                          118   1e-24

>gb|ACU23806.1| unknown [Glycine max]
          Length = 175

 Score =  132 bits (331), Expect = 7e-29
 Identities = 66/152 (43%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
 Frame = -3

Query: 584 TTQDSQTFHWRYDELDDKNFQIRGRXXXXXXXXXXXXXXXXXXXFYARWICRXXXXXXXX 405
           ++ DS++F W Y ELDD++ +IRGR                    Y RW+CR        
Sbjct: 2   SSPDSRSFSWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPTT 61

Query: 404 XXXXXXSPHIQMFSRPQGLDSAMIDSLPITLHHRPXXXXXXXXXXXXC-ICLGVFEEGEK 228
                 + H    ++PQG+D A I  LPI LHH P            C ICLG F +GEK
Sbjct: 62  AFTAAAA-HASPLAQPQGMDPASIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEK 120

Query: 227 VKVLPKCSHAYHCDCVDKWLTTHSSCPICRAA 132
           VKVLP C H +HCDCVDKWLT HSSCP+CRA+
Sbjct: 121 VKVLPACDHYFHCDCVDKWLTHHSSCPLCRAS 152


>ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  131 bits (330), Expect = 1e-28
 Identities = 66/152 (43%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
 Frame = -3

Query: 584 TTQDSQTFHWRYDELDDKNFQIRGRXXXXXXXXXXXXXXXXXXXFYARWICRXXXXXXXX 405
           ++ DS++F W Y ELDD++ +IRGR                    Y RW+CR        
Sbjct: 2   SSPDSRSFSWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPTT 61

Query: 404 XXXXXXSPHIQMFSRPQGLDSAMIDSLPITLHHRPXXXXXXXXXXXXC-ICLGVFEEGEK 228
                 + H    ++PQG+D A I  LPI LHH P            C ICLG F +GEK
Sbjct: 62  AFTAAAA-HAPPLAQPQGMDPASIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEK 120

Query: 227 VKVLPKCSHAYHCDCVDKWLTTHSSCPICRAA 132
           VKVLP C H +HCDCVDKWLT HSSCP+CRA+
Sbjct: 121 VKVLPACDHYFHCDCVDKWLTHHSSCPLCRAS 152


>ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  130 bits (327), Expect = 2e-28
 Identities = 66/149 (44%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
 Frame = -3

Query: 575 DSQTFHWRYDELDDKNFQIRGRXXXXXXXXXXXXXXXXXXXFYARWICRXXXXXXXXXXX 396
           D+++F+W Y ELDD++ +IRGR                    Y RW+CR           
Sbjct: 5   DTRSFNWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPTTAFS 64

Query: 395 XXXSPHIQMFSRPQGLDSAMIDSLPITLHHRPXXXXXXXXXXXXC-ICLGVFEEGEKVKV 219
                H    + PQGLD A I  LPI LHH P            C ICLG F +GEKVKV
Sbjct: 65  AAAV-HAPPLAPPQGLDPASIKKLPIILHHAPADRDESAWDETECCICLGEFRDGEKVKV 123

Query: 218 LPKCSHAYHCDCVDKWLTTHSSCPICRAA 132
           LP C H +HCDCVDKWLT HSSCP+CRA+
Sbjct: 124 LPACDHYFHCDCVDKWLTHHSSCPLCRAS 152


>ref|XP_002312167.1| predicted protein [Populus trichocarpa] gi|222851987|gb|EEE89534.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  129 bits (323), Expect = 6e-28
 Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
 Frame = -3

Query: 581 TQDSQTFHWRYDELDDKNFQIRGRXXXXXXXXXXXXXXXXXXXFYARWICRXXXXXXXXX 402
           +QDSQ FHW Y+ELD+ +FQ+RGR                    YARW+C          
Sbjct: 3   SQDSQPFHWHYEELDENDFQVRGRALFYVLIVGSMIILIALLSIYARWVCLENTRHNLPS 62

Query: 401 XXXXXSPHIQMFSRPQGLDSAMIDSLPITLH--HRPXXXXXXXXXXXXCICLGVFEEGEK 228
                  H      P+GL+S +I +LPITLH  +              CICLGVFE+G++
Sbjct: 63  RLPV---HHAPRLPPRGLESTIIKALPITLHKSNLGTSNNGTAVESECCICLGVFEDGDR 119

Query: 227 VKVLPKCSHAYHCDCVDKWLTTHSSCPICRAA 132
           +KVLP+C H +HCDCVDKWL T SSCP+CRA+
Sbjct: 120 LKVLPQCQHCFHCDCVDKWLVTQSSCPLCRAS 151


>gb|AFK39456.1| unknown [Medicago truncatula]
          Length = 173

 Score =  118 bits (295), Expect = 1e-24
 Identities = 62/152 (40%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
 Frame = -3

Query: 584 TTQDSQTFHWRYDELDDKNFQIRGRXXXXXXXXXXXXXXXXXXXFYARWICRXXXXXXXX 405
           ++ +S++ +W Y ELDD++ +I+GR                   FY RW+CR        
Sbjct: 2   SSPNSRSLNWHYTELDDRDLEIKGRTLFFVIVLFSIFLLVIVLFFYTRWVCRYHTHITTT 61

Query: 404 XXXXXXSPHIQMFSRPQGLDSAMIDSLPITLHHRPXXXXXXXXXXXXC-ICLGVFEEGEK 228
                 +P  Q    PQGLD A I  LPI LH  P            C ICLG F +GEK
Sbjct: 62  YSASIHAPPAQP---PQGLDPAAIKKLPIILHQAPTDPENGAWEETECCICLGEFRDGEK 118

Query: 227 VKVLPKCSHAYHCDCVDKWLTTHSSCPICRAA 132
           +KVLP C H +HCDCVDKWLT  SSCP+CR +
Sbjct: 119 LKVLPGCEHYFHCDCVDKWLTHQSSCPLCRGS 150


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