BLASTX nr result

ID: Atractylodes21_contig00021333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021333
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   328   e-112
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   317   e-110
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   320   e-106
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   318   e-106
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   319   e-106

>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  328 bits (842), Expect(2) = e-112
 Identities = 150/258 (58%), Positives = 193/258 (74%)
 Frame = -1

Query: 774  LPIPAAVWEDISLDFITGLPKSKGFEVVLVVVDRLSKYCHFIPLKHPITARSLAEIFLRE 595
            LPIP  +W D+SLDF+ GLP S  F  +LVVVDRLSKY HFIPLKHP TA+++ E F+R+
Sbjct: 1261 LPIPQQIWSDVSLDFVEGLPSSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRD 1320

Query: 594  VIRLHGIPKSLLSDRDPLFLSKFWKEIFSLQGSQLKFSSAYHPETDGQTEIVNRSLETYL 415
            V++LHG P +L+SDRD +FLS FW E+F LQG+ L+ S+AYHP+TDGQTE+VNR LE+YL
Sbjct: 1321 VVKLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYL 1380

Query: 414  RCFAAEQPKTWSYWLPWAEFWHNTSYHVSTNTTPFDVVYGRPPPSVLQFVPGEIRCESVA 235
            RCFA  +P +W  WLPWAE+W+NTSYH +T TTPF  VYGR PP +L++        +V 
Sbjct: 1381 RCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVE 1440

Query: 234  RDLVDRDEALKQLKYHLTRAQAQMKSTADKHRRDVEFKVGDWAFLKLRPHRQQSVVRRIN 55
              L DRD  L +L+ +L  AQAQMK  ADK RRDV F++ +W +LKLRP+RQ SV  R N
Sbjct: 1441 ELLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKN 1500

Query: 54   QKLSARYYGPFLIVEKGG 1
            +KLS RY+GPF ++ + G
Sbjct: 1501 EKLSQRYFGPFKVLHRIG 1518



 Score =  104 bits (260), Expect(2) = e-112
 Identities = 46/113 (40%), Positives = 69/113 (61%)
 Frame = -2

Query: 1094 DQQLQKIVADLTTNPQSHSGFFLSNGKLFHKGKLVISASSHLIPKLIADFHDSPSGGHSG 915
            D +L +I+ +        S F +++G ++ KG LVI   S  IPK++  FH SP GGH G
Sbjct: 1154 DHELSQILKNWAQGDHHDSDFTVADGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEG 1213

Query: 914  FYRTYRRLASQIYWLGMTKTIRNYVQACDVCQRYKSSTLAPGGLLQRYPFQQR 756
              +T++RL S++YW G+ K + NY++ C +CQ  K STL+P GLL   P  Q+
Sbjct: 1214 ALKTFKRLTSEVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQ 1266


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  317 bits (813), Expect(2) = e-110
 Identities = 139/258 (53%), Positives = 195/258 (75%)
 Frame = -1

Query: 774  LPIPAAVWEDISLDFITGLPKSKGFEVVLVVVDRLSKYCHFIPLKHPITARSLAEIFLRE 595
            LPIP A+WEDIS+DF+ GLPKS+G++ +LVVVDRLSKY HFI LKHP TA ++A +F++E
Sbjct: 1168 LPIPLAIWEDISMDFVEGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAAVFIKE 1227

Query: 594  VIRLHGIPKSLLSDRDPLFLSKFWKEIFSLQGSQLKFSSAYHPETDGQTEIVNRSLETYL 415
            +++LHG P +++SDRD +F+S FWKE+F LQG+ L  S+AYHP++DGQTE+VN+SLE YL
Sbjct: 1228 IVKLHGFPSTIVSDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQSDGQTEVVNKSLEAYL 1287

Query: 414  RCFAAEQPKTWSYWLPWAEFWHNTSYHVSTNTTPFDVVYGRPPPSVLQFVPGEIRCESVA 235
            RCF   +PK W+ W+ WAE+W+NTS H S++ TPF +VYGR  P + +F  G     S+ 
Sbjct: 1288 RCFCNGRPKAWAQWISWAEYWYNTSTHSSSHFTPFKIVYGRDSPPLFRFEKGSTAIFSLE 1347

Query: 234  RDLVDRDEALKQLKYHLTRAQAQMKSTADKHRRDVEFKVGDWAFLKLRPHRQQSVVRRIN 55
              L+DRD  L +LK+HL  AQ  MK   DKHRR V F+ G   +LK++P+R QS+ ++ N
Sbjct: 1348 EQLLDRDATLDELKFHLLEAQNSMKIQEDKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRN 1407

Query: 54   QKLSARYYGPFLIVEKGG 1
            +KL+ R+YGPF ++++ G
Sbjct: 1408 EKLAPRFYGPFSVLKRIG 1425



 Score =  107 bits (267), Expect(2) = e-110
 Identities = 48/109 (44%), Positives = 71/109 (65%)
 Frame = -2

Query: 1094 DQQLQKIVADLTTNPQSHSGFFLSNGKLFHKGKLVISASSHLIPKLIADFHDSPSGGHSG 915
            D  LQ ++A++T       GF + +G L + G+LVI  +  L   L+ ++H SP GGHSG
Sbjct: 1061 DADLQHLMAEVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSG 1120

Query: 914  FYRTYRRLASQIYWLGMTKTIRNYVQACDVCQRYKSSTLAPGGLLQRYP 768
             ++TY+RLA + YW GM K +  +VQ C +CQ++K+STL+P GLLQ  P
Sbjct: 1121 IFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLP 1169


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  320 bits (819), Expect(2) = e-106
 Identities = 142/258 (55%), Positives = 195/258 (75%)
 Frame = -1

Query: 774  LPIPAAVWEDISLDFITGLPKSKGFEVVLVVVDRLSKYCHFIPLKHPITARSLAEIFLRE 595
            LPIP  +WED+S+DF+ GLP S+G  V++VVVDRLSKY HF+ LKHP TA  +A  F+ E
Sbjct: 2336 LPIPNRIWEDVSMDFVEGLPGSQGVNVIMVVVDRLSKYAHFVGLKHPFTAVEVASKFVSE 2395

Query: 594  VIRLHGIPKSLLSDRDPLFLSKFWKEIFSLQGSQLKFSSAYHPETDGQTEIVNRSLETYL 415
            V++ HG P+S++SDRD +FLS FWK++F   G++LK+S+A+HP+TDGQTE++NR +ETYL
Sbjct: 2396 VVKHHGFPRSIVSDRDRVFLSSFWKDLFRASGTKLKYSTAFHPQTDGQTEVLNRCMETYL 2455

Query: 414  RCFAAEQPKTWSYWLPWAEFWHNTSYHVSTNTTPFDVVYGRPPPSVLQFVPGEIRCESVA 235
            RCFA+  P+TW  +L WAE W+NTS+H +   TPF VVYGR PP++++F  G      + 
Sbjct: 2456 RCFASSHPRTWHKFLSWAELWYNTSFHTALKATPFQVVYGREPPAIVRFEEGSTNNYDLE 2515

Query: 234  RDLVDRDEALKQLKYHLTRAQAQMKSTADKHRRDVEFKVGDWAFLKLRPHRQQSVVRRIN 55
              L +RD  L Q++ HL RAQ  MK++ADKHRR++ F VGDW +LKL+P RQ +VVRR  
Sbjct: 2516 MALRERDAMLVQIQQHLLRAQHLMKASADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYC 2575

Query: 54   QKLSARYYGPFLIVEKGG 1
            QKL+A+Y+GP+ I E+ G
Sbjct: 2576 QKLAAKYFGPYEISERIG 2593



 Score = 93.2 bits (230), Expect(2) = e-106
 Identities = 43/111 (38%), Positives = 68/111 (61%)
 Frame = -2

Query: 1088 QLQKIVADLTTNPQSHSGFFLSNGKLFHKGKLVISASSHLIPKLIADFHDSPSGGHSGFY 909
            ++QK +  +      +  F + +GKL++K +LVI   S  IP L++++HD   GGHSG  
Sbjct: 2231 EIQKKIQWIKEGKIVNDKFRVIDGKLWYKRRLVIPKDSASIPLLLSEYHDGQQGGHSGVL 2290

Query: 908  RTYRRLASQIYWLGMTKTIRNYVQACDVCQRYKSSTLAPGGLLQRYPFQQR 756
            +T +R+ S  +W G+ + ++ YV  C++CQ +K STLAP GLLQ  P   R
Sbjct: 2291 KTVKRIQSMFHWEGLYQRVQKYVSECNICQTHKYSTLAPAGLLQPLPIPNR 2341


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  318 bits (815), Expect(2) = e-106
 Identities = 146/258 (56%), Positives = 193/258 (74%)
 Frame = -1

Query: 774  LPIPAAVWEDISLDFITGLPKSKGFEVVLVVVDRLSKYCHFIPLKHPITARSLAEIFLRE 595
            L +P  +W DIS+DFI GLPKS GFE + VVVDR SKY HF+ LKHP TA+++AEIF++E
Sbjct: 2083 LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEIFVKE 2142

Query: 594  VIRLHGIPKSLLSDRDPLFLSKFWKEIFSLQGSQLKFSSAYHPETDGQTEIVNRSLETYL 415
            ++RLHG PKS++SDRD +F+S FWK +F L G++L  S+AYHP+TDGQTE+VNRS+ETYL
Sbjct: 2143 IVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYL 2202

Query: 414  RCFAAEQPKTWSYWLPWAEFWHNTSYHVSTNTTPFDVVYGRPPPSVLQFVPGEIRCESVA 235
            RCF +E+PK W+ WL WAE+W+NT++H S   TPF  VYGR PP +L +         + 
Sbjct: 2203 RCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTSNFLLD 2262

Query: 234  RDLVDRDEALKQLKYHLTRAQAQMKSTADKHRRDVEFKVGDWAFLKLRPHRQQSVVRRIN 55
              L  RDE L+ LK HL  AQ +MK TAD  RRDVE+KVGD  FLK+RP+RQ S+ ++ N
Sbjct: 2263 EQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKN 2322

Query: 54   QKLSARYYGPFLIVEKGG 1
            +KLS +++GPF + E+ G
Sbjct: 2323 EKLSPKFFGPFEVTERIG 2340



 Score = 94.4 bits (233), Expect(2) = e-106
 Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
 Frame = -2

Query: 1100 DSDQQLQKIVADLTTNPQS-HSGFFLSNGKLFHKGKLVISASSHLIPKLIADFHDSPSGG 924
            + D +L+K+  +L +  ++    F + +G L +K +LV+S SS LIP ++  +HDS  GG
Sbjct: 1973 EEDIRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGG 2032

Query: 923  HSGFYRTYRRLASQIYWLGMTKTIRNYVQACDVCQRYKSSTLAPGGLL 780
            HSGF RTY+R+  ++YW GM   I+ Y   C +CQ+ KS  L P GLL
Sbjct: 2033 HSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLL 2080


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  319 bits (817), Expect(2) = e-106
 Identities = 148/258 (57%), Positives = 197/258 (76%)
 Frame = -1

Query: 774  LPIPAAVWEDISLDFITGLPKSKGFEVVLVVVDRLSKYCHFIPLKHPITARSLAEIFLRE 595
            LPIP+ VWEDIS+DFI GLP SKG + +LV+VDRLSKY HF+ L+HP TA  +A++F++E
Sbjct: 1235 LPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADLFVKE 1294

Query: 594  VIRLHGIPKSLLSDRDPLFLSKFWKEIFSLQGSQLKFSSAYHPETDGQTEIVNRSLETYL 415
            V+RLHG P S++SDRD +FLS FWKE+F L G+ LK SSAYHP+TDGQTEIVNR+LETYL
Sbjct: 1295 VVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRALETYL 1354

Query: 414  RCFAAEQPKTWSYWLPWAEFWHNTSYHVSTNTTPFDVVYGRPPPSVLQFVPGEIRCESVA 235
            RCF    P++W+ WLPWAEF +NTS H ST  +PF V+YGR PP V++   G+   ES+ 
Sbjct: 1355 RCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSVESLE 1414

Query: 234  RDLVDRDEALKQLKYHLTRAQAQMKSTADKHRRDVEFKVGDWAFLKLRPHRQQSVVRRIN 55
              L DRD  +  L+ +L RAQ +MK  AD  R +VEF+VGD  FL+L+P+RQ+S+ +R  
Sbjct: 1415 AMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLAKRPF 1474

Query: 54   QKLSARYYGPFLIVEKGG 1
            +KL+ R+YGPF ++++ G
Sbjct: 1475 EKLAPRFYGPFTVLQRIG 1492



 Score = 93.2 bits (230), Expect(2) = e-106
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = -2

Query: 1040 SGFFLSNGKLFHKGKLVISASSHLIPKLIADFHDSPSGGHSGFYRTYRRLASQIYWLGMT 861
            S F L +G L  KG+ VI +SS +IPKL+ ++HD+P GGH+G  +TY RLA++ YW GM 
Sbjct: 1146 SHFTLVDGNLLFKGRYVIPSSSTIIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMR 1205

Query: 860  KTIRNYVQACDVCQRYKSSTLAPGGLLQRYP 768
            + +  YV  C +CQ+ K S   P GLLQ  P
Sbjct: 1206 QEVARYVHQCLICQQQKVSQQHPRGLLQPLP 1236


Top