BLASTX nr result

ID: Atractylodes21_contig00021241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021241
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul...    87   5e-27
gb|AFK36740.1| unknown [Lotus japonicus]                               86   2e-26
dbj|BAD95789.1| LSD-One-Like 1 [Brassica rapa]                         85   2e-26
ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm...    84   3e-26
ref|XP_004148489.1| PREDICTED: protein LOL1-like isoform 1 [Cucu...    84   4e-26

>ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula]
           gi|217075072|gb|ACJ85896.1| unknown [Medicago
           truncatula] gi|217075520|gb|ACJ86120.1| unknown
           [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc
           finger protein LSD1 [Medicago truncatula]
           gi|388499772|gb|AFK37952.1| unknown [Medicago
           truncatula] gi|388500106|gb|AFK38119.1| unknown
           [Medicago truncatula]
          Length = 154

 Score = 87.0 bits (214), Expect(2) = 5e-27
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -2

Query: 704 TSGSQSQLVCSGCRNLLLYLVGATSVCCAVCKSVTAAPPRGTEMAQLV 561
           T+G+QSQLVCSGCRNLL+Y VGATSVCCAVC +VTA PP GTEMAQLV
Sbjct: 27  TNGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLV 74



 Score = 60.8 bits (146), Expect(2) = 5e-27
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -3

Query: 490 GTEMAQLVCGGCHTLLMYICGATSVQCVVCQFI 392
           GTEMAQLVCGGCHTLLMYI GATSVQC  C  +
Sbjct: 67  GTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTV 99


>gb|AFK36740.1| unknown [Lotus japonicus]
          Length = 145

 Score = 85.5 bits (210), Expect(2) = 2e-26
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -2

Query: 704 TSGSQSQLVCSGCRNLLLYLVGATSVCCAVCKSVTAAPPRGTEMAQLV 561
           T+G+QSQLVCSGCRNLL+Y VGATSVCCAVC +VT+ PP GTEMAQLV
Sbjct: 19  TNGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLV 66



 Score = 60.8 bits (146), Expect(2) = 2e-26
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -3

Query: 490 GTEMAQLVCGGCHTLLMYICGATSVQCVVCQFI 392
           GTEMAQLVCGGCHTLLMYI GATSVQC  C  +
Sbjct: 59  GTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTV 91


>dbj|BAD95789.1| LSD-One-Like 1 [Brassica rapa]
          Length = 155

 Score = 85.1 bits (209), Expect(2) = 2e-26
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -2

Query: 704 TSGSQSQLVCSGCRNLLLYLVGATSVCCAVCKSVTAAPPRGTEMAQLV 561
           ++G QSQLVCSGCRNLL+Y VGATSVCCAVC +VTA PP GTEMAQLV
Sbjct: 29  STGGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLV 76



 Score = 60.8 bits (146), Expect(2) = 2e-26
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -3

Query: 490 GTEMAQLVCGGCHTLLMYICGATSVQCVVCQFI 392
           GTEMAQLVCGGCHTLLMYI GATSVQC  C  +
Sbjct: 69  GTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTV 101


>ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis]
           gi|223532335|gb|EEF34134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score = 84.3 bits (207), Expect(2) = 3e-26
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = -2

Query: 701 SGSQSQLVCSGCRNLLLYLVGATSVCCAVCKSVTAAPPRGTEMAQLV 561
           +G+QSQLVCSGCRNLLLY  GATSVCCAVC +VTA PP GTEMAQLV
Sbjct: 22  NGAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLV 68



 Score = 61.2 bits (147), Expect(2) = 3e-26
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -3

Query: 490 GTEMAQLVCGGCHTLLMYICGATSVQCVVCQFI 392
           GTEMAQLVCGGCHTLLMYI GATSVQC  C  I
Sbjct: 61  GTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTI 93


>ref|XP_004148489.1| PREDICTED: protein LOL1-like isoform 1 [Cucumis sativus]
           gi|449461521|ref|XP_004148490.1| PREDICTED: protein
           LOL1-like isoform 2 [Cucumis sativus]
           gi|449523109|ref|XP_004168567.1| PREDICTED: protein
           LOL1-like isoform 1 [Cucumis sativus]
           gi|449523111|ref|XP_004168568.1| PREDICTED: protein
           LOL1-like isoform 2 [Cucumis sativus]
          Length = 144

 Score = 84.0 bits (206), Expect(2) = 4e-26
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -2

Query: 704 TSGSQSQLVCSGCRNLLLYLVGATSVCCAVCKSVTAAPPRGTEMAQLV 561
           ++ +QSQLVCSGCRNLLLY VGATSVCCAVC +VTA PP GTEMAQLV
Sbjct: 20  SNATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLV 67



 Score = 60.8 bits (146), Expect(2) = 4e-26
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -3

Query: 490 GTEMAQLVCGGCHTLLMYICGATSVQCVVCQFI 392
           GTEMAQLVCGGCHTLLMYI GATSVQC  C  +
Sbjct: 60  GTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTV 92


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