BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021190
         (3271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1330   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1329   0.0  
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...  1329   0.0  
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1304   0.0  
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1302   0.0  

>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1330 bits (3441), Expect = 0.0
 Identities = 673/994 (67%), Positives = 792/994 (79%), Gaps = 16/994 (1%)
 Frame = -2

Query: 3177 LASSTLFSPSPRADFQSPWSTKNVKPRTP------QKPTLHLFKNQSQTPLIYSSSFPHN 3016
            +AS+ +F P P A  Q P    + KP           P+ H   +      + SSSF HN
Sbjct: 1    MASTAVFLPIPHAKIQKPKKLDHHKPHRTLPVLFTSNPSPHFHTSTISKNSLSSSSFRHN 60

Query: 3015 LKLPSLKDPISSTHSHPLPDSVDENFTKNLENLATLQRITHGLDSVSNSEIKQK--RVFI 2842
               PS     S    H LP S   N      ++ TLQ      DS SN ++K+   R+F+
Sbjct: 61   FHSPSHSSN-SEAQCHALPLSPTNN------SIETLQ------DS-SNIQVKESIPRIFV 106

Query: 2841 QEPPWITSLLMKNFYRNSVK--KRVKVEI---ERRNYYLLRRRQIKAETEAWEKMTEEYR 2677
            Q+PPWI+S L  ++   + +  + VK+E    ERRNY LLRRRQ+KAETEAWE+M EEYR
Sbjct: 107  QDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMVEEYR 166

Query: 2676 EFQREMCEKKLAPNLPYVKALFAGWFEPLSKAIEKEQKSPNSKKHQEAYAPYIDSLPADK 2497
            E +REMCEKKLAPNLPYVKALF GWFEPL +AI+KEQ++  +KK + AYAP+I+ LPADK
Sbjct: 167  EIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADK 226

Query: 2496 MAVIVXXXXXXXXXXXHEYRYVRVVQAAIQIGMAVELEVRIQTFLERTKNSSKKKVLIQA 2317
            MAVIV           HE   VRVVQAA+QIGMA+E EVRI +FLE+TKN  + K +  +
Sbjct: 227  MAVIVMHKMMGLVMMGHEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHS 286

Query: 2316 QEDVTKENEMXXXXXXXXXXXXXIMEVQKILRNEEYQLWGRDKQAKLGCRLIELLTEIAY 2137
            QE + +E E+             I+EVQK+++NEE   WGRD QAKLG RLIELLTE AY
Sbjct: 287  QEGL-REKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAY 345

Query: 2136 VQSPASQSADAPPDIRPAFRHIFKIVAMESGHV--RKCGVIECDKMILIGLEKTARHMII 1963
            VQ+P +QSAD PPD+RPAFRH FK V  ESG    RK GVIECD ++LIGL++TA+HM+I
Sbjct: 346  VQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVI 405

Query: 1962 PYVPMLVPPRKWKGYDCGGHFFLPSYLMRTHGSRQQQEAVKTVPFTQMQKVYEALDTLGN 1783
            PYVPML+PP+KWKGYD GG+ FLPSY+MRTHGSR+QQ+AVK+VP  Q+QKV+EALDTLGN
Sbjct: 406  PYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGN 465

Query: 1782 TKWRVNKRLLNVVESIWAAGGDVAGLVNREDVSVPDLNS-EDLSEIREWRWSVRKAKKIN 1606
            TKWR+N+R+L+VVESIWA GG++ GLV+RE+V +P+  S EDL+EI+ W+W+ RKAKKIN
Sbjct: 466  TKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKIN 525

Query: 1605 QELHSQRCDIELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 1426
            QE HS RCD E+KLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA
Sbjct: 526  QERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 585

Query: 1425 EGRPLGKSGLRWLRIHLANLYGAGVEKLSYDGRLEFVENHLNDIIDSADNPLGGNRWWLT 1246
            EGRPLGKSGLRWL+I LANLY  GVEKLSYDGRL FV+NHL+D+ DSADNPL GNRWWLT
Sbjct: 586  EGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLT 645

Query: 1245 AEDPFQCLAACINLSETLKSPSPHTVISHLPVHQDGSCNGLQHYXXXXXXXXXXXAVNLV 1066
            AEDPFQCLAACINLSE L+S SPHTVISHLP+HQDGSCNGLQHY           AVNLV
Sbjct: 646  AEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLV 705

Query: 1065 AGEKPSDVYSEIAARVHDIMQSDSEKDPTSYPNALLARVLIGQVNRKLVKQTVMTSVYGV 886
            AGEKP+DVYSEIAARVH+IM+ DS KDP + P ALLA+VLIGQV+RKLVKQTVMTSVYGV
Sbjct: 706  AGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGV 765

Query: 885  TFIGAREQIKRRLLEKGHITDDQLLFSASCYAAKVTLEALGEIFEAARGTMCWLGDCAKV 706
            T+IGAREQIKRRL EKG ITD++LLF+A+CYAAKVTL ALGEIF+AAR  M WLG+CAKV
Sbjct: 766  TYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKV 825

Query: 705  IASENQPVRWTTPLGLPVVQPYFKTKRHIIKTSLQVLALQREGSMVDVKKQRTAFPPNFV 526
            IASENQPV+WTTPLGLPV+QPY K++RH+I+TSLQVLALQREGS+V ++KQRTAFPPNFV
Sbjct: 826  IASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFV 885

Query: 525  HSLDGTHMMMTALACRDAGLRFAGVHDSFWTHACDIDKMNQILREKFVELYNIPILENLL 346
            HSLDG+HMMMTA+ACRDAGL FAGVHDSFWTHACD+DKMNQILREKFVELY++PILENLL
Sbjct: 886  HSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLL 945

Query: 345  ESFQTTYPGVEFPPLPKRGNFDLNEVLKSPYFFN 244
            ESFQT++P + FPPLP RGNFDL EVL+SPYFFN
Sbjct: 946  ESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score = 1329 bits (3440), Expect = 0.0
 Identities = 668/993 (67%), Positives = 798/993 (80%), Gaps = 15/993 (1%)
 Frame = -2

Query: 3177 LASSTLFSPSPRADFQSPWSTKNVKPRTPQKPTLHLFKNQ-----SQTPLIYSSSFPHNL 3013
            +AS+  +SPSP     S W T+ +    P++   ++  NQ     SQ+  + +SSFP  L
Sbjct: 1    MASTASYSPSPT----SQWRTQKL----PKRFNFYVIHNQEFGKLSQSSSLSTSSFPKTL 52

Query: 3012 KLPSLKDPISSTHSHPLPDSVDENFTKNLENLATLQRITHG-LDSVSNSEIKQKRVFIQE 2836
            KLP +  PI++  S     +V  +  +NLE L  LQ+I +G L+  SN     KRVFIQ+
Sbjct: 53   KLPVIHMPINNIQSQT---TVCVSTDENLEELVNLQKIPNGFLNKESN-----KRVFIQD 104

Query: 2835 PPWITSLLMKNFYRNSVK----KRVKVEIERRNYY-LLRRRQIKAETEAWEKMTEEYREF 2671
            PPW++SL M + +  + +    +R   EIERR  Y +LRRRQIKAETEAWE+M EEYRE 
Sbjct: 105  PPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYREL 164

Query: 2670 QREMCEKKLAPNLPYVKALFAGWFEPLSKAIEKEQKSPNSKKHQEAYAPYIDSLPADKMA 2491
            +REMCEKKLAPNLPYVK L  GWFEPL +AIEKEQ +  + KH+ A+AP+IDSLPADKMA
Sbjct: 165  EREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMA 224

Query: 2490 VIVXXXXXXXXXXXH-EYRYVRVVQAAIQIGMAVELEVRIQTFLERTKNSSKKKVLIQAQ 2314
            VIV             E R V+VVQAA+QIGMAVE EVRI  FLE+TK   K     Q+Q
Sbjct: 225  VIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQ 284

Query: 2313 EDVTKENEMXXXXXXXXXXXXXIMEVQKILRNEEYQLWGRDKQAKLGCRLIELLTEIAYV 2134
            ED++KE  +             ++EV+K++++EE + WGRD QAKLGCRL+ELLTE AYV
Sbjct: 285  EDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYV 344

Query: 2133 QSPASQSADAPPDIRPAFRHIFKIVAMESGH--VRKCGVIECDKMILIGLEKTARHMIIP 1960
            Q P  QSAD PPDIRPAFRH+FKI   + G   V+K GVIECD +++ G+++T + M+IP
Sbjct: 345  QRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMMIP 404

Query: 1959 YVPMLVPPRKWKGYDCGGHFFLPSYLMRTHGSRQQQEAVKTVPFTQMQKVYEALDTLGNT 1780
            YVPMLVPP+KW+GYD GG+ FLPSYLMRTHGSR+QQ+AV+ VP  QMQ+VYEALDTLG+T
Sbjct: 405  YVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLGST 464

Query: 1779 KWRVNKRLLNVVESIWAAGGDVAGLVNREDVSVPDL-NSEDLSEIREWRWSVRKAKKINQ 1603
            KWRVNKR+LNVVESIWA GG++AGLV+R+DV +P+L NS+D+ E+++W+W VRK+KKINQ
Sbjct: 465  KWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQ 524

Query: 1602 ELHSQRCDIELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAE 1423
            ELHSQRCD ELKLSVAR++KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAE
Sbjct: 525  ELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAE 584

Query: 1422 GRPLGKSGLRWLRIHLANLYGAGVEKLSYDGRLEFVENHLNDIIDSADNPLGGNRWWLTA 1243
            GRPLGKSGLRWL+IHLA+LY  GVEKL YD RL FVENH++DI+DSA+NPL GNRWWL A
Sbjct: 585  GRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNA 644

Query: 1242 EDPFQCLAACINLSETLKSPSPHTVISHLPVHQDGSCNGLQHYXXXXXXXXXXXAVNLVA 1063
            EDPFQCLAACINLSE LKS SPHTVISHLP+HQDGSCNGLQHY           AVNLVA
Sbjct: 645  EDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVA 704

Query: 1062 GEKPSDVYSEIAARVHDIMQSDSEKDPTSYPNALLARVLIGQVNRKLVKQTVMTSVYGVT 883
            GEKP+DVY+EIA RV  I++ DS KDP   PNALLA++LI QV+RKLVKQTVMTSVYGVT
Sbjct: 705  GEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGVT 764

Query: 882  FIGAREQIKRRLLEKGHITDDQLLFSASCYAAKVTLEALGEIFEAARGTMCWLGDCAKVI 703
            ++GAREQIKRRL EKG I DD+LLF+ASCYAAKVTL ALGE+F+AARGTM WLGDCAKVI
Sbjct: 765  YVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVI 824

Query: 702  ASENQPVRWTTPLGLPVVQPYFKTKRHIIKTSLQVLALQREGSMVDVKKQRTAFPPNFVH 523
            A ENQPVRWTTPLGLPVVQPYFKT+RH+I+TSLQ+LALQREG  V+V+KQRTAFPPNFVH
Sbjct: 825  ALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNFVH 884

Query: 522  SLDGTHMMMTALACRDAGLRFAGVHDSFWTHACDIDKMNQILREKFVELYNIPILENLLE 343
            SLDG+HMMMTA+ACRDAGL+FAGVHDSFWTHACD+D+MN+ILREKFVELY++PILE+LLE
Sbjct: 885  SLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLE 944

Query: 342  SFQTTYPGVEFPPLPKRGNFDLNEVLKSPYFFN 244
            +FQ +YP + FPPLPKRG+F+L EVL+SPYFFN
Sbjct: 945  NFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score = 1329 bits (3439), Expect = 0.0
 Identities = 661/991 (66%), Positives = 799/991 (80%), Gaps = 13/991 (1%)
 Frame = -2

Query: 3177 LASSTLFSPSPRADFQSPWSTKNVKPRTPQKPTLHLFKNQ-----SQTPLIYSSSFPHNL 3013
            +AS+  +SPSP     S W T+ +    P++   ++  NQ     SQ+  + +SSFP  L
Sbjct: 1    MASTASYSPSPT----SQWRTQKL----PKRFNFYVIHNQEFGKLSQSSSLPTSSFPKTL 52

Query: 3012 KLPSLKDPISSTHSHPLPDSVDENFTKNLENLATLQRITHGLDSVSNSEIKQKRVFIQEP 2833
            KLP ++ PI++         V  +  +NLE L  LQ+I +G+ +  ++    KRVFIQ+P
Sbjct: 53   KLPVIQMPINNNIQSQTTVCVSTD--ENLEELVNLQKIANGVLTKESN----KRVFIQDP 106

Query: 2832 PWITSLLMKNFYRNSVK----KRVKVEIERRNYY-LLRRRQIKAETEAWEKMTEEYREFQ 2668
            PW++SL M + +  + +    +R   EIERR  Y +LRRRQIKAETEAWE+M EEYRE +
Sbjct: 107  PWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELE 166

Query: 2667 REMCEKKLAPNLPYVKALFAGWFEPLSKAIEKEQKSPNSKKHQEAYAPYIDSLPADKMAV 2488
            REMCEKKLAPNLPYVK L  GWFEPL +AIEKEQ +  + KH+ A+AP+IDSLPADKMAV
Sbjct: 167  REMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAV 226

Query: 2487 IVXXXXXXXXXXXH-EYRYVRVVQAAIQIGMAVELEVRIQTFLERTKNSSKKKVLIQAQE 2311
            IV             E R V+VVQAA+QIGMAVE EVRI  FLE+TK   K     Q+QE
Sbjct: 227  IVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQE 286

Query: 2310 DVTKENEMXXXXXXXXXXXXXIMEVQKILRNEEYQLWGRDKQAKLGCRLIELLTEIAYVQ 2131
            D+++E  +             ++EV+K++++EE + WGRD QAKLGCRL+ELLTE AYVQ
Sbjct: 287  DMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQ 346

Query: 2130 SPASQSADAPPDIRPAFRHIFKIVAMESGH--VRKCGVIECDKMILIGLEKTARHMIIPY 1957
             P  QSAD PPDIRPAFRH+F+I   + G   V+K GVIECD +++ G+++T + M+IPY
Sbjct: 347  PPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIPY 406

Query: 1956 VPMLVPPRKWKGYDCGGHFFLPSYLMRTHGSRQQQEAVKTVPFTQMQKVYEALDTLGNTK 1777
            VPMLVPP+KW+GYD GG+ FLPSYLMRTHGSR+QQ+AV++VP  QMQ+VYEALDTLG+TK
Sbjct: 407  VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGSTK 466

Query: 1776 WRVNKRLLNVVESIWAAGGDVAGLVNREDVSVPDLNSEDLSEIREWRWSVRKAKKINQEL 1597
            WRVNKR+L+VVESIWA GG++AGLV+R+DV +P+L+S+D+ E+++W+W VRK+KKINQEL
Sbjct: 467  WRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQEL 526

Query: 1596 HSQRCDIELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1417
            HSQRCD ELKLSVAR++KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR
Sbjct: 527  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 586

Query: 1416 PLGKSGLRWLRIHLANLYGAGVEKLSYDGRLEFVENHLNDIIDSADNPLGGNRWWLTAED 1237
            PLGKSGLRWL+IHLA+LY  G+EKL YD RL FVENH++DI+DSA+NPL GNRWWL AED
Sbjct: 587  PLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAED 646

Query: 1236 PFQCLAACINLSETLKSPSPHTVISHLPVHQDGSCNGLQHYXXXXXXXXXXXAVNLVAGE 1057
            PFQCLAACINLSE LKS SPHTV SHLP+HQDGSCNGLQHY           AVNLVAG+
Sbjct: 647  PFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGD 706

Query: 1056 KPSDVYSEIAARVHDIMQSDSEKDPTSYPNALLARVLIGQVNRKLVKQTVMTSVYGVTFI 877
            KP+DVY+EIA RV  I++ DS KDP + PNALLA++LI QV+RKLVKQTVMTSVYGVT++
Sbjct: 707  KPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYV 766

Query: 876  GAREQIKRRLLEKGHITDDQLLFSASCYAAKVTLEALGEIFEAARGTMCWLGDCAKVIAS 697
            GAREQIKRRL EKG I DD+LLF+ASCYAAKVTL ALGE+F+AARGTM WLGDCAKVIAS
Sbjct: 767  GAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIAS 826

Query: 696  ENQPVRWTTPLGLPVVQPYFKTKRHIIKTSLQVLALQREGSMVDVKKQRTAFPPNFVHSL 517
            ENQPVRWTTPLGLPVVQPYFKT+RH+I+TSLQVLALQREG  V+V+KQRTAFPPNFVHSL
Sbjct: 827  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHSL 886

Query: 516  DGTHMMMTALACRDAGLRFAGVHDSFWTHACDIDKMNQILREKFVELYNIPILENLLESF 337
            DG+HMMMTA+ACRDAGL+FAGVHDSFWTHACD+D+MN+ILREKFVELY++PILE+LLESF
Sbjct: 887  DGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESF 946

Query: 336  QTTYPGVEFPPLPKRGNFDLNEVLKSPYFFN 244
            Q +YP + FPPLPKRG+FDL EVL+SPYFFN
Sbjct: 947  QNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1304 bits (3375), Expect = 0.0
 Identities = 651/960 (67%), Positives = 775/960 (80%), Gaps = 11/960 (1%)
 Frame = -2

Query: 3090 QKPTLHLFKNQSQTPLIYSSSFPHNLKLPSLKDPIS------STHSHPLPDSVDENFTKN 2929
            +KPT   +K + +T   ++S+F  N  L S+  P++      S H  PL DSV ENFT+ 
Sbjct: 22   KKPTKR-WKCERKTHPSFTSTF--NSPLSSVSFPVNFDSTSQSLHLQPLADSVHENFTET 78

Query: 2928 LENLATLQRITHGLDSVSNSEIKQKRVFIQEPPWITSLLMKNFYRNSVKKRVKVE---IE 2758
            L+N   LQ     +  ++  E   KR+FIQ+PPWI SL +K  Y+  V+K VK+E   IE
Sbjct: 79   LDNSMNLQIPISEIHQITRGE-SSKRIFIQDPPWIASLFLKGLYK-CVQKEVKLEFMEIE 136

Query: 2757 RRNYYLLRRRQIKAETEAWEKMTEEYREFQREMCEKKLAPNLPYVKALFAGWFEPLSKAI 2578
            +R Y LLRRRQIKAETEAWEKM EEY+E +REMCEKKLAPNLPYVK LF GWFEPL  AI
Sbjct: 137  KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAI 196

Query: 2577 EKEQKSPNSKKHQEAYAPYIDSLPADKMAVIVXXXXXXXXXXXHEYRYVRVVQAAIQIGM 2398
            E+EQK+  SKK + A+AP+I+ L ADKMAVIV            +   V+VVQAA+QIG 
Sbjct: 197  EEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQVVQAAVQIGG 256

Query: 2397 AVELEVRIQTFLERTKNSSKKKVLIQAQEDVTKENEMXXXXXXXXXXXXXIMEVQKILRN 2218
            A+E EVRIQ+ LE+ +++ + KV     E +TKE E+             + EVQK+L+ 
Sbjct: 257  AIEQEVRIQSILEKARSNQRTKVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKK 315

Query: 2217 EEYQLWGRDKQAKLGCRLIELLTEIAYVQSPASQSADAPPDIRPAFRHIFKIVAMESGH- 2041
            EE++ WGRD QAKLG RLIELL E A++Q P SQSAD+PPDIRPAF H FK VA   G  
Sbjct: 316  EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQN 375

Query: 2040 -VRKCGVIECDKMILIGLEKTARHMIIPYVPMLVPPRKWKGYDCGGHFFLPSYLMRTHGS 1864
             V+K GV+ECD ++L GL++TA+HM+IPY+PMLVPP+KWKGYD GGHFFLPSY+MRTHGS
Sbjct: 376  FVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGS 435

Query: 1863 RQQQEAVKTVPFTQMQKVYEALDTLGNTKWRVNKRLLNVVESIWAAGGDVAGLVNREDVS 1684
             +QQ+A+K +   QMQKV+EALD LG+TKWRVN+ +L+VVES+WA GG+ AGLV+R+DV 
Sbjct: 436  SRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVP 495

Query: 1683 VPDLNSEDLSEIREWRWSVRKAKKINQELHSQRCDIELKLSVARRMKDEEGFYYPHNLDF 1504
            +P+    DL+E++EWRWS++KAKKINQELHSQRCD+ELKLSVAR+MKDEEGFYYPHNLDF
Sbjct: 496  IPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDF 555

Query: 1503 RGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLRIHLANLYGAGVEKLSYDGRL 1324
            RGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WL+IHLANLY  GVEKLSYD RL
Sbjct: 556  RGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERL 615

Query: 1323 EFVENHLNDIIDSADNPLGGNRWWLTAEDPFQCLAACINLSETLKSPSPHTVISHLPVHQ 1144
             FV++HL++I DSA NP+ G+RWWLTAEDPFQCLAAC+NLSE LKS +PHTVIS+LP+HQ
Sbjct: 616  AFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQ 675

Query: 1143 DGSCNGLQHYXXXXXXXXXXXAVNLVAGEKPSDVYSEIAARVHDIMQSDSEKDPTSYPNA 964
            DGSCNGLQHY           AVNLVAGEKP+DVYSEIAARVH IM  D+ KDPT+ PNA
Sbjct: 676  DGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNA 735

Query: 963  LLARVLIGQVNRKLVKQTVMTSVYGVTFIGAREQIKRRLLEKGHITDDQLLFSASCYAAK 784
             LA++LI QV+RKLVKQTVMTSVYGVT+IGAREQIKRRL EKG I+DD+L F ASCYAAK
Sbjct: 736  SLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAK 795

Query: 783  VTLEALGEIFEAARGTMCWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTKRHIIKTSL 604
            VTL ALGEIFEAARG M WLGDCAKVIA +NQPVRWTTPLGLPVVQPY+K++RH+I+TSL
Sbjct: 796  VTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSL 855

Query: 603  QVLALQREGSMVDVKKQRTAFPPNFVHSLDGTHMMMTALACRDAGLRFAGVHDSFWTHAC 424
            QVLALQREG++VDV+KQRTAFPPNFVHSLDG+HMM+TALACRDAGLRFAGVHDSFWTHAC
Sbjct: 856  QVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHAC 915

Query: 423  DIDKMNQILREKFVELYNIPILENLLESFQTTYPGVEFPPLPKRGNFDLNEVLKSPYFFN 244
            D+D+MN ILREKFVELY++P+LE+LLE F+TTYPG+ FP LP RG+FDL EVLKSPYFFN
Sbjct: 916  DVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1302 bits (3370), Expect = 0.0
 Identities = 650/960 (67%), Positives = 774/960 (80%), Gaps = 11/960 (1%)
 Frame = -2

Query: 3090 QKPTLHLFKNQSQTPLIYSSSFPHNLKLPSLKDPIS------STHSHPLPDSVDENFTKN 2929
            +KPT   +K + +T   ++S+F  N  L S+  P++      S H  PL DSV ENFT+ 
Sbjct: 22   KKPTKR-WKCERKTHTSFTSTF--NSPLSSVSFPVNFDSTSQSLHLQPLADSVHENFTET 78

Query: 2928 LENLATLQRITHGLDSVSNSEIKQKRVFIQEPPWITSLLMKNFYRNSVKKRVKVE---IE 2758
            L+N   LQ     +  ++  E   KR+FIQ+PPWI SL +K  Y+  V+K VK+E   IE
Sbjct: 79   LDNSMNLQIPISEIHQITRGE-SSKRIFIQDPPWIASLFLKGLYK-CVQKEVKLEFMEIE 136

Query: 2757 RRNYYLLRRRQIKAETEAWEKMTEEYREFQREMCEKKLAPNLPYVKALFAGWFEPLSKAI 2578
            +R Y LLRRRQIKAETEAWEKM EEY+E +REMCEKKLAPNLPYVK LF GWFEPL  AI
Sbjct: 137  KRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAI 196

Query: 2577 EKEQKSPNSKKHQEAYAPYIDSLPADKMAVIVXXXXXXXXXXXHEYRYVRVVQAAIQIGM 2398
            E+EQK+  SKK + A+AP+I+ L ADKMA IV            +   V+VVQAA+QIG 
Sbjct: 197  EEEQKTQRSKKQKAAFAPHIELLSADKMAGIVMYKMMGLLMMAAQDGCVQVVQAAVQIGG 256

Query: 2397 AVELEVRIQTFLERTKNSSKKKVLIQAQEDVTKENEMXXXXXXXXXXXXXIMEVQKILRN 2218
            A+E EVRIQ+ LE+ +++ + KV     E +TKE E+             + EVQK+L+ 
Sbjct: 257  AIEQEVRIQSILEKARSNQRTKVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKK 315

Query: 2217 EEYQLWGRDKQAKLGCRLIELLTEIAYVQSPASQSADAPPDIRPAFRHIFKIVAMESGH- 2041
            EE++ WGRD QAKLG RLIELL E A++Q P SQSAD+PPDIRPAF H FK VA   G  
Sbjct: 316  EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQN 375

Query: 2040 -VRKCGVIECDKMILIGLEKTARHMIIPYVPMLVPPRKWKGYDCGGHFFLPSYLMRTHGS 1864
             V+K GV+ECD ++L GL++TA+HM+IPY+PMLVPP+KWKGYD GGHFFLPSY+MRTHGS
Sbjct: 376  FVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGS 435

Query: 1863 RQQQEAVKTVPFTQMQKVYEALDTLGNTKWRVNKRLLNVVESIWAAGGDVAGLVNREDVS 1684
             +QQ+A+K +   QMQKV+EALD LG+TKWRVN+ +L+VVES+WA GG+ AGLV+R+DV 
Sbjct: 436  SRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVP 495

Query: 1683 VPDLNSEDLSEIREWRWSVRKAKKINQELHSQRCDIELKLSVARRMKDEEGFYYPHNLDF 1504
            +P+    DL+E++EWRWS++KAKKINQELHSQRCD+ELKLSVAR+MKDEEGFYYPHNLDF
Sbjct: 496  IPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDF 555

Query: 1503 RGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLRIHLANLYGAGVEKLSYDGRL 1324
            RGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WL+IHLANLY  GVEKLSYD RL
Sbjct: 556  RGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERL 615

Query: 1323 EFVENHLNDIIDSADNPLGGNRWWLTAEDPFQCLAACINLSETLKSPSPHTVISHLPVHQ 1144
             FV++HL++I DSA NP+ G+RWWLTAEDPFQCLAAC+NLSE LKS +PHTVIS+LP+HQ
Sbjct: 616  AFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQ 675

Query: 1143 DGSCNGLQHYXXXXXXXXXXXAVNLVAGEKPSDVYSEIAARVHDIMQSDSEKDPTSYPNA 964
            DGSCNGLQHY           AVNLVAGEKP+DVYSEIAARVH IM  D+ KDPT+ PNA
Sbjct: 676  DGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNA 735

Query: 963  LLARVLIGQVNRKLVKQTVMTSVYGVTFIGAREQIKRRLLEKGHITDDQLLFSASCYAAK 784
             LA++LI QV+RKLVKQTVMTSVYGVT+IGAREQIKRRL EKG I+DD+L F ASCYAAK
Sbjct: 736  SLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAK 795

Query: 783  VTLEALGEIFEAARGTMCWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTKRHIIKTSL 604
            VTL ALGEIFEAARG M WLGDCAKVIA +NQPVRWTTPLGLPVVQPY+K++RH+I+TSL
Sbjct: 796  VTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSL 855

Query: 603  QVLALQREGSMVDVKKQRTAFPPNFVHSLDGTHMMMTALACRDAGLRFAGVHDSFWTHAC 424
            QVLALQREG++VDV+KQRTAFPPNFVHSLDG+HMM+TALACRDAGLRFAGVHDSFWTHAC
Sbjct: 856  QVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHAC 915

Query: 423  DIDKMNQILREKFVELYNIPILENLLESFQTTYPGVEFPPLPKRGNFDLNEVLKSPYFFN 244
            D+D+MN ILREKFVELY++P+LE+LLE F+TTYPG+ FP LP RG+FDL EVLKSPYFFN
Sbjct: 916  DVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975