BLASTX nr result

ID: Atractylodes21_contig00021151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021151
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...    89   4e-16
ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...    85   7e-15
ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|NP_175349.1| RING-H2 finger protein ATL78 [Arabidopsis thali...    83   2e-14

>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/86 (58%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
 Frame = +1

Query: 1   SRKLLLHDPMYQHIATVVHTGAEVIAVSPAPSH-------YIGNKSFDVNVVMVLSVLLC 159
           SR+LLLH P+Y          +   A  PAP +       Y GN SFD NVVMVLSVLLC
Sbjct: 20  SRRLLLHTPLYH---------SPTAAAPPAPGYSQEASEPYTGNNSFDANVVMVLSVLLC 70

Query: 160 AIICSLGLNSIIRCVLRCSSSVHSES 237
           A+ICSLGLNSIIRC LRCSS V S S
Sbjct: 71  ALICSLGLNSIIRCALRCSSLVASRS 96


>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = +1

Query: 1   SRKLLLHDPMYQHIATVVHTGAEVIAVSPAPSHYIGNKSFDVNVVMVLSVLLCAIICSLG 180
           SR+LLLH P+++  AT           S  P  Y G+ SFD NVVMVLSVLLCA+ICSLG
Sbjct: 21  SRRLLLHSPLHESPATASPPATGNSHDSSEP--YTGSNSFDTNVVMVLSVLLCALICSLG 78

Query: 181 LNSIIRCVLRCSSSVHS 231
           LNSIIRC LRCSS V S
Sbjct: 79  LNSIIRCALRCSSLVAS 95


>ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|222845967|gb|EEE83514.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/86 (55%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
 Frame = +1

Query: 1   SRKLLLHDPMYQHIATVVHTGAEVIAVSPAPSHYIGNK-------SFDVNVVMVLSVLLC 159
           SR+LLLH P+YQ   T         A  PAP +   ++       SFD NVVMVLS+LLC
Sbjct: 21  SRRLLLHTPLYQSSNT---------ATPPAPGNTASSETYTSTDNSFDANVVMVLSILLC 71

Query: 160 AIICSLGLNSIIRCVLRCSSSVHSES 237
           A+ICSLGLNSIIRC LRCS+ V SES
Sbjct: 72  ALICSLGLNSIIRCALRCSNLVASES 97


>ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|222874628|gb|EEF11759.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/79 (62%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   SRKLLLHDPMYQHIATVVHTGAEVIAVSPAPSHYIGNKSFDVNVVMVLSVLLCAIICSLG 180
           SR+LLLH+P+YQ   T         A S  PS   G+ SFD NVVMVLSVLLCA+ICSLG
Sbjct: 20  SRRLLLHNPLYQSTNTATPPAPGNSAPSE-PSTGTGS-SFDANVVMVLSVLLCALICSLG 77

Query: 181 LNSIIRCVLRCSSSVHSES 237
           LNSIIRC LRCS+   SES
Sbjct: 78  LNSIIRCALRCSNIAASES 96


>ref|NP_175349.1| RING-H2 finger protein ATL78 [Arabidopsis thaliana]
           gi|68565178|sp|Q6NQG7.1|ATL78_ARATH RecName:
           Full=RING-H2 finger protein ATL78
           gi|34365601|gb|AAQ65112.1| At1g49230 [Arabidopsis
           thaliana] gi|51970612|dbj|BAD43998.1| putative RING zinc
           finger protein [Arabidopsis thaliana]
           gi|51971166|dbj|BAD44275.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|332194286|gb|AEE32407.1| RING-H2 finger protein ATL78
           [Arabidopsis thaliana]
          Length = 219

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = +1

Query: 82  SPAPSHYIGNKSFDVNVVMVLSVLLCAIICSLGLNSIIRCVLRCSSSVHSES 237
           +PAPS Y+G+ +FD NVVMVLSVLLCA++CSLGLNSIIRC LRCS+ V SE+
Sbjct: 40  TPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEA 91


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