BLASTX nr result

ID: Atractylodes21_contig00021149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021149
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...    57   3e-07
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]    55   2e-06
emb|CBI23512.3| unnamed protein product [Vitis vinifera]               55   4e-06
ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...    55   8e-06

>ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
           microcephaly-associated protein homolog, partial [Vitis
           vinifera]
          Length = 1022

 Score = 57.4 bits (137), Expect(2) = 3e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 440 VLQVSDILEY*GACNDQGMIILLVFLSSHLIVKRNLVMPK 321
           VLQ SDILE+ GACND+ ++ILLVFLSS L+VKRN V  K
Sbjct: 599 VLQTSDILEHNGACNDRSVVILLVFLSSQLVVKRNTVSSK 638



 Score = 21.9 bits (45), Expect(2) = 3e-07
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 267 SIYQQLINFHKLLG 226
           S  Q  +NFHKLLG
Sbjct: 652 SSQQDQLNFHKLLG 665


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score = 55.1 bits (131), Expect(2) = 2e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -1

Query: 440 VLQVSDILEY*GACNDQGMIILLVFLSSHLIVKRN 336
           VLQ SDILE+ GACND+ ++ILLVFLSS L+VKRN
Sbjct: 641 VLQTSDILEHNGACNDRSVVILLVFLSSQLVVKRN 675



 Score = 21.2 bits (43), Expect(2) = 2e-06
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 9/47 (19%)
 Frame = -3

Query: 249 INFHKLLG-------HNQNSERKCFRRD*FLENHE--GELNVKETCQ 136
           +NFHKLLG         ++S  + F     +EN E  G  N ++T Q
Sbjct: 679 LNFHKLLGCTCQIPEGKRSSMGRLFMSYKAVENQEETGGQNAEDTVQ 725


>emb|CBI23512.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score = 55.1 bits (131), Expect(2) = 4e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -1

Query: 440 VLQVSDILEY*GACNDQGMIILLVFLSSHLIVKRN 336
           VLQ SDILE+ GACND+ ++ILLVFLSS L+VKRN
Sbjct: 640 VLQTSDILEHNGACNDRSVVILLVFLSSQLVVKRN 674



 Score = 20.4 bits (41), Expect(2) = 4e-06
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 249 INFHKLLG 226
           +NFHKLLG
Sbjct: 678 LNFHKLLG 685


>ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
           microcephaly-associated protein homolog [Glycine max]
          Length = 1350

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/142 (27%), Positives = 65/142 (45%)
 Frame = -1

Query: 440 VLQVSDILEY*GACNDQGMIILLVFLSSHLIVKRNLVMPKLSSHRVTLNTLETSRFYYLY 261
           VLQ+S++L++ GAC+D+ ++ILLVFL++ L VK+NL    L+ H++     ++    +L 
Sbjct: 583 VLQISELLQHNGACSDRSVVILLVFLANQLFVKKNL--DHLNFHKLLGYDCQSPNHRHL- 639

Query: 260 TSN**IFISSWVIIKIQRGNVSGEIDSLKTMKGNLM*KKLVRMTTNVSSIGSCFFIAFGF 81
                                                 +L+R  +N  SI          
Sbjct: 640 --------------------------------------RLLRCLSNSESIQKPDASDVHG 661

Query: 80  HVDNGKYFKAIMAWWKEMAQHN 15
           + D  + FKAI AWW++MA+ N
Sbjct: 662 NEDGARKFKAIQAWWQDMAERN 683


Top