BLASTX nr result

ID: Atractylodes21_contig00021123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021123
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    94   9e-18
ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002519475.1| protein binding protein, putative [Ricinus c...    81   8e-14
emb|CAN68707.1| hypothetical protein VITISV_001643 [Vitis vinifera]    81   8e-14

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/104 (48%), Positives = 68/104 (65%)
 Frame = +3

Query: 3   GVQGSHVFYKRTGSQSYQKTGSLLAPVDRIRLPKSTIINKQNHSPMFVSANEVTSNLVLH 182
           G+QGSHV  KR G   YQK GS  A V+ IRL +S II+ Q+H P+FVS +E+T  LVL 
Sbjct: 503 GMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSAIIDLQSHHPLFVSGDEITHELVLQ 562

Query: 183 DISTLAVFQRLKTTKNQIWDVGCTEIWNSCVLGCLSGDIVQLFS 314
           ++ +L V QRLK+ K+ + DV  +   +  +L CLS D +Q FS
Sbjct: 563 ELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQFFS 606


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/104 (48%), Positives = 68/104 (65%)
 Frame = +3

Query: 3   GVQGSHVFYKRTGSQSYQKTGSLLAPVDRIRLPKSTIINKQNHSPMFVSANEVTSNLVLH 182
           G+QGSHV  KR G   YQK GS  A V+ IRL +S II+ Q+H P+FVS +E+T  LVL 
Sbjct: 460 GMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSAIIDLQSHHPLFVSGDEITHELVLQ 519

Query: 183 DISTLAVFQRLKTTKNQIWDVGCTEIWNSCVLGCLSGDIVQLFS 314
           ++ +L V QRLK+ K+ + DV  +   +  +L CLS D +Q FS
Sbjct: 520 ELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQFFS 563


>ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/104 (46%), Positives = 69/104 (66%)
 Frame = +3

Query: 3   GVQGSHVFYKRTGSQSYQKTGSLLAPVDRIRLPKSTIINKQNHSPMFVSANEVTSNLVLH 182
           GV GSH+  KR GS +Y+K G   + V  IRLPKS+II++QN  P+F + +EV+  L+L 
Sbjct: 575 GVLGSHLHLKRAGS-NYEKLGIACSTVSGIRLPKSSIIDRQNQKPLFATGDEVSCGLILQ 633

Query: 183 DISTLAVFQRLKTTKNQIWDVGCTEIWNSCVLGCLSGDIVQLFS 314
           ++ +    QRLK+ ++ I+DV  T   +  +LGCLS D VQLFS
Sbjct: 634 ELPSFTATQRLKSHQHFIYDVKYTSTHSQGLLGCLSEDTVQLFS 677


>ref|XP_002519475.1| protein binding protein, putative [Ricinus communis]
           gi|223541338|gb|EEF42889.1| protein binding protein,
           putative [Ricinus communis]
          Length = 606

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/104 (40%), Positives = 65/104 (62%)
 Frame = +3

Query: 3   GVQGSHVFYKRTGSQSYQKTGSLLAPVDRIRLPKSTIINKQNHSPMFVSANEVTSNLVLH 182
           GV GSH+  KRT  + YQ+ G+  A +  IRLPKS I++ +N  P+F + +E +  L+L 
Sbjct: 500 GVLGSHLHLKRTDDK-YQELGTASATISNIRLPKSVIVDMENRKPLFAAGDEASCGLILQ 558

Query: 183 DISTLAVFQRLKTTKNQIWDVGCTEIWNSCVLGCLSGDIVQLFS 314
           ++ + +  QRLK+ K+ I DV      +  ++GCLS D +QLFS
Sbjct: 559 ELPSFSYAQRLKSHKHLICDVKYKRTLSLGLVGCLSEDTLQLFS 602


>emb|CAN68707.1| hypothetical protein VITISV_001643 [Vitis vinifera]
          Length = 514

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = +3

Query: 3   GVQGSHVFYKRTGSQSYQKTGSLLAPVDRIRLPKSTIINKQNHSPMFVSANEVTSNLVLH 182
           G+QGSHV  KR G   YQK GS  A V+  RL +S II+ Q+H P+FVS +E+T  LVL 
Sbjct: 309 GMQGSHVLLKRVGGNCYQKLGSSCANVNDXRLXRSAIIDLQSHHPLFVSGDEITHELVLQ 368

Query: 183 DISTLAVFQRLKTTKNQIWDV 245
           ++ +L V QRLK+ K+ + DV
Sbjct: 369 ELPSLRVSQRLKSQKHPLRDV 389


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