BLASTX nr result

ID: Atractylodes21_contig00021087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021087
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   133   6e-29
emb|CBI15506.3| unnamed protein product [Vitis vinifera]              133   6e-29
emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]   130   3e-28
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   129   1e-27
ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   127   4e-27

>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  133 bits (334), Expect = 6e-29
 Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 MGSQGFNSQKN-GQRLGITEPISLGGPSEYDVIKTNDLEKFLANAGLYESHEEAISREEV 83
           M + G N++ N GQRLGITEPISLGGP+E DV KT +LEKFLA AGLYES EEA+SREEV
Sbjct: 1   MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 82  LGRLDQIVKVWVKKVSRARGLNEQLVQ 2
           LGRLDQIVK+WVK +SRA+GLNEQLVQ
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQLVQ 87


>emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  133 bits (334), Expect = 6e-29
 Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 MGSQGFNSQKN-GQRLGITEPISLGGPSEYDVIKTNDLEKFLANAGLYESHEEAISREEV 83
           M + G N++ N GQRLGITEPISLGGP+E DV KT +LEKFLA AGLYES EEA+SREEV
Sbjct: 1   MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 82  LGRLDQIVKVWVKKVSRARGLNEQLVQ 2
           LGRLDQIVK+WVK +SRA+GLNEQLVQ
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQLVQ 87


>emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
          Length = 1097

 Score =  130 bits (328), Expect = 3e-28
 Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 MGSQGFNSQKNG-QRLGITEPISLGGPSEYDVIKTNDLEKFLANAGLYESHEEAISREEV 83
           M + G N++ N  QRLGITEPISLGGP+E DV KT +LEKFLA AGLYES EEA+SREEV
Sbjct: 1   MSNLGLNNRNNSSQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 82  LGRLDQIVKVWVKKVSRARGLNEQLVQ 2
           LGRLDQIVK+WVK +SRA+GLNEQLVQ
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQLVQ 87


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
           gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
           putative [Ricinus communis]
          Length = 770

 Score =  129 bits (323), Expect = 1e-27
 Identities = 64/89 (71%), Positives = 77/89 (86%), Gaps = 3/89 (3%)
 Frame = -2

Query: 259 MGSQGFNSQKNGQ---RLGITEPISLGGPSEYDVIKTNDLEKFLANAGLYESHEEAISRE 89
           MGS G +++ NGQ   RLGIT+PISLGGP+EYD+IK+ +LEKFL + GLYES EE++SRE
Sbjct: 1   MGSPGLSTRNNGQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSRE 60

Query: 88  EVLGRLDQIVKVWVKKVSRARGLNEQLVQ 2
           EVLGRLDQIVK WVK +SRA+GLNEQLVQ
Sbjct: 61  EVLGRLDQIVKHWVKVISRAKGLNEQLVQ 89


>ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
           gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A)
           polymerase-like [Cucumis sativus]
          Length = 748

 Score =  127 bits (319), Expect = 4e-27
 Identities = 62/87 (71%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 MGSQGFNSQKNGQ-RLGITEPISLGGPSEYDVIKTNDLEKFLANAGLYESHEEAISREEV 83
           MGS     + NGQ RLGIT+PISL GP+EYDV+KT +LEK+L +AGLYES E+A++REEV
Sbjct: 1   MGSPALCGRNNGQQRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEV 60

Query: 82  LGRLDQIVKVWVKKVSRARGLNEQLVQ 2
           LGRLDQIVK+WVK +SRA+GLNEQLVQ
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQLVQ 87


Top