BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021047
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   137   9e-31
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   121   7e-26
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   121   7e-26
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   117   1e-24

>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/150 (43%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
 Frame = +3

Query: 3   PGCKNVKKDK-AKKTGLAPPIQILKICKYCDKNLRDVYPPTKFKVSTKDVFGQSTIIAEI 179
           PGCK+V+++   K           K C+YC  +L+D YPP +FK+ST D+F +S I+ E+
Sbjct: 99  PGCKSVRQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIMVEV 158

Query: 180 KSS-----RKLTSDNGLPPDYWDFVPNDHQQDEAFSTFSRRVLTHAQVYEILKDVDPSYL 344
           K +     +K  +  GLP DYWDF+P D QQ+E++   +R++LTHAQV+ +LKD+DP +L
Sbjct: 159 KENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFL 218

Query: 345 KGYLGKKNKIFLQSFPLTPNCHRVAEFGQN 434
           K ++   + +FL SFP+TPN HRV E   +
Sbjct: 219 KKFVPAIDSLFLNSFPVTPNSHRVTEMAHS 248


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  121 bits (303), Expect = 7e-26
 Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 6/146 (4%)
 Frame = +3

Query: 3   PGCKNVKKDKAKKTGLAPPIQIL-KICKYCDKNLRDVYPPTKFKVSTKDVFGQSTIIAEI 179
           PGCK+ ++ +  K   +   ++  K CKYC  N  D YP  KFKVS+KD+F ++ II E+
Sbjct: 132 PGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEM 191

Query: 180 -----KSSRKLTSDNGLPPDYWDFVPNDHQQDEAFSTFSRRVLTHAQVYEILKDVDPSYL 344
                K  +K +    LP DYWDF+P D QQ+E     +RRVL+HAQV+ +LKD+DP ++
Sbjct: 192 NEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFI 251

Query: 345 KGYLGKKNKIFLQSFPLTPNCHRVAE 422
           K ++ + +  FL   P+TPN HRV E
Sbjct: 252 KEFVSRMDSFFLNCLPVTPNNHRVTE 277


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  121 bits (303), Expect = 7e-26
 Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 6/146 (4%)
 Frame = +3

Query: 3   PGCKNVKKDKAKKTGLAPPIQIL-KICKYCDKNLRDVYPPTKFKVSTKDVFGQSTIIAEI 179
           PGCK+ ++ +  K   +   ++  K CKYC  N  D YP  KFKVS+KD+F ++ II E+
Sbjct: 99  PGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEM 158

Query: 180 -----KSSRKLTSDNGLPPDYWDFVPNDHQQDEAFSTFSRRVLTHAQVYEILKDVDPSYL 344
                K  +K +    LP DYWDF+P D QQ+E     +RRVL+HAQV+ +LKD+DP ++
Sbjct: 159 NEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFI 218

Query: 345 KGYLGKKNKIFLQSFPLTPNCHRVAE 422
           K ++ + +  FL   P+TPN HRV E
Sbjct: 219 KEFVSRMDSFFLNCLPVTPNNHRVTE 244


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 5/145 (3%)
 Frame = +3

Query: 3   PGCKNVKKDKAKKTGLAPPIQILKICKYCDKNLRDVYPPTKFKVSTKDVFGQSTIIAEI- 179
           PGCK+ ++ +  K          K CKYC  N  D YP  KFKVS+KD+F ++ II E+ 
Sbjct: 99  PGCKSTRQGQWVKVRRLRS----KGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMN 154

Query: 180 ----KSSRKLTSDNGLPPDYWDFVPNDHQQDEAFSTFSRRVLTHAQVYEILKDVDPSYLK 347
               K  +K +    LP DYWDF+P D QQ+E     +RRVL+HAQV+ +LKD+DP ++K
Sbjct: 155 EKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIK 214

Query: 348 GYLGKKNKIFLQSFPLTPNCHRVAE 422
            ++ + +  FL   P+TPN HRV E
Sbjct: 215 EFVSRMDSFFLNCLPVTPNNHRVTE 239


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
 Frame = +3

Query: 3   PGCKNVKKDKAKKTGLAPPIQILKICKYCDKNLRDVYPPTKFKVSTKDVFGQSTIIAEIK 182
           PGCK+++  KA +       Q  K CKYC  N    YPP KFKVS+K++F ++ IIAEI+
Sbjct: 128 PGCKSIRLAKATELITKENPQ-RKGCKYCAGNSLGWYPPMKFKVSSKEIFRKTAIIAEIR 186

Query: 183 SSRKLTSDNG----LPPDYWDFVPNDHQQDEAFSTF--SRRVLTHAQVYEILKDVDPSYL 344
            +       G    L  DYWD  P D Q++E  +    +RRVL+H+QV  +LKDVDP+++
Sbjct: 187 ETLSKKPQKGFKKILAADYWDIFPKDEQEEEEETNAKPNRRVLSHSQVRHMLKDVDPNFI 246

Query: 345 KGYLGKKNKIFLQSFPLTPNCHRVAE 422
           K  + K + IFL  FP+TPN HRV E
Sbjct: 247 KLSILKTDTIFLNCFPVTPNSHRVTE 272