BLASTX nr result

ID: Atractylodes21_contig00021046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021046
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [V...   127   1e-27
gb|ABK22002.1| unknown [Picea sitchensis]                             124   6e-27
emb|CAC84677.1| putative histone H2A [Pinus pinaster]                 123   1e-26
ref|XP_001777344.1| histone H2A variant [Physcomitrella patens s...   121   5e-26
ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycin...   121   7e-26

>ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [Vitis vinifera]
           gi|147787162|emb|CAN64650.1| hypothetical protein
           VITISV_002812 [Vitis vinifera]
           gi|297743375|emb|CBI36242.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  127 bits (318), Expect = 1e-27
 Identities = 74/95 (77%), Positives = 75/95 (78%)
 Frame = -1

Query: 286 MSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXRAGLQFPVGRVHRLLKTRVSASG 107
           MSGKGAKGLIMGK  SS LNG                 AGLQFPVGRVHRLLKTRVSA+G
Sbjct: 1   MSGKGAKGLIMGK--SSTLNGNKDKDKKKPISRSSR--AGLQFPVGRVHRLLKTRVSANG 56

Query: 106 RVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 2
           RVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK
Sbjct: 57  RVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 91


>gb|ABK22002.1| unknown [Picea sitchensis]
          Length = 145

 Score =  124 bits (312), Expect = 6e-27
 Identities = 69/98 (70%), Positives = 77/98 (78%)
 Frame = -1

Query: 295 GVKMSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXRAGLQFPVGRVHRLLKTRVS 116
           G  MSGKGAKGL+MGK SS+ +N                 RAGLQFPVGR+HRLLK+R+S
Sbjct: 4   GGNMSGKGAKGLLMGK-SSAPVNNNNSKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRIS 62

Query: 115 ASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 2
           A+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 63  ANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 100


>emb|CAC84677.1| putative histone H2A [Pinus pinaster]
          Length = 139

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/95 (71%), Positives = 76/95 (80%)
 Frame = -1

Query: 286 MSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXRAGLQFPVGRVHRLLKTRVSASG 107
           MSGKGAKGL+MGK SS+ +N                 RAGLQFPVGR+HRLLK+R+SA+G
Sbjct: 1   MSGKGAKGLLMGK-SSAPVNNNNNKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRISANG 59

Query: 106 RVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 2
           RVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 60  RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 94


>ref|XP_001777344.1| histone H2A variant [Physcomitrella patens subsp. patens]
           gi|162671320|gb|EDQ57874.1| histone H2A variant
           [Physcomitrella patens subsp. patens]
          Length = 143

 Score =  121 bits (304), Expect = 5e-26
 Identities = 68/98 (69%), Positives = 77/98 (78%)
 Frame = -1

Query: 295 GVKMSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXRAGLQFPVGRVHRLLKTRVS 116
           G   SGKGAKGL+MGKA++SA+                  RAGLQFPVGR+HRLLK+RV+
Sbjct: 2   GGNQSGKGAKGLLMGKAAASAV--VDDKSKDKKKPTSRSSRAGLQFPVGRIHRLLKSRVA 59

Query: 115 ASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 2
           A+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 60  ANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 97


>ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycine max]
           gi|255628199|gb|ACU14444.1| unknown [Glycine max]
          Length = 136

 Score =  121 bits (303), Expect = 7e-26
 Identities = 69/95 (72%), Positives = 75/95 (78%)
 Frame = -1

Query: 286 MSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXRAGLQFPVGRVHRLLKTRVSASG 107
           MSGKGAKGLI GK S+SA +                 RAGLQFPVGR+HRLLK+RVSA+G
Sbjct: 1   MSGKGAKGLITGKTSASAKD----KDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRVSANG 56

Query: 106 RVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 2
           RVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 57  RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 91


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