BLASTX nr result

ID: Atractylodes21_contig00021024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021024
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|2...   124   7e-27
emb|CBI24863.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote...   120   1e-25
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   120   2e-25
ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Me...   120   2e-25

>ref|XP_002299952.1| predicted protein [Populus trichocarpa]
           gi|224104033|ref|XP_002313290.1| predicted protein
           [Populus trichocarpa] gi|118483640|gb|ABK93714.1|
           unknown [Populus trichocarpa]
           gi|222847210|gb|EEE84757.1| predicted protein [Populus
           trichocarpa] gi|222849698|gb|EEE87245.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score =  124 bits (312), Expect = 7e-27
 Identities = 67/95 (70%), Positives = 69/95 (72%)
 Frame = -3

Query: 535 GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDXXXXXX 356
           GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTD      
Sbjct: 31  GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTD------ 84

Query: 355 XXXXXXXXXXXXXXXXXXXXGTEEIANPFIQPDGA 251
                               GT+EIANPF+QPDGA
Sbjct: 85  --------------------GTDEIANPFVQPDGA 99


>emb|CBI24863.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  120 bits (302), Expect = 1e-25
 Identities = 66/95 (69%), Positives = 67/95 (70%)
 Frame = -3

Query: 535 GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDXXXXXX 356
           GTLKGYDQLLNLVLDEAVEFLRD DDP KTTDQTRRLGLIVCRGTAVMLVSPTD      
Sbjct: 39  GTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTD------ 92

Query: 355 XXXXXXXXXXXXXXXXXXXXGTEEIANPFIQPDGA 251
                               GT+EIANPFIQPDGA
Sbjct: 93  --------------------GTDEIANPFIQPDGA 107


>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Vitis vinifera] gi|359487265|ref|XP_003633552.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Vitis vinifera]
           gi|359487267|ref|XP_003633553.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 3
           [Vitis vinifera] gi|359487269|ref|XP_003633554.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 4 [Vitis vinifera]
          Length = 99

 Score =  120 bits (302), Expect = 1e-25
 Identities = 66/95 (69%), Positives = 67/95 (70%)
 Frame = -3

Query: 535 GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDXXXXXX 356
           GTLKGYDQLLNLVLDEAVEFLRD DDP KTTDQTRRLGLIVCRGTAVMLVSPTD      
Sbjct: 31  GTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTD------ 84

Query: 355 XXXXXXXXXXXXXXXXXXXXGTEEIANPFIQPDGA 251
                               GT+EIANPFIQPDGA
Sbjct: 85  --------------------GTDEIANPFIQPDGA 99


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  120 bits (300), Expect = 2e-25
 Identities = 65/95 (68%), Positives = 67/95 (70%)
 Frame = -3

Query: 535 GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDXXXXXX 356
           GTLKGYDQLLNLVLDEAVEFLRD DDPLKTTDQTR LGLIVCRGTAVMLVSPTD      
Sbjct: 31  GTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTD------ 84

Query: 355 XXXXXXXXXXXXXXXXXXXXGTEEIANPFIQPDGA 251
                               GT+EIANPFIQPDG+
Sbjct: 85  --------------------GTDEIANPFIQPDGS 99


>ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
           gi|355498170|gb|AES79373.1| U6 snRNA-associated Sm-like
           protein LSm7 [Medicago truncatula]
          Length = 130

 Score =  120 bits (300), Expect = 2e-25
 Identities = 65/95 (68%), Positives = 67/95 (70%)
 Frame = -3

Query: 535 GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDXXXXXX 356
           GTLKGYDQLLNLVLDEAVEFLRD DDPLKTTDQTR LGLIVCRGTAVMLVSPTD      
Sbjct: 62  GTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTD------ 115

Query: 355 XXXXXXXXXXXXXXXXXXXXGTEEIANPFIQPDGA 251
                               GT+EIANPF+QPDGA
Sbjct: 116 --------------------GTDEIANPFLQPDGA 130


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