BLASTX nr result

ID: Atractylodes21_contig00021015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021015
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   231   2e-58
emb|CBI16098.3| unnamed protein product [Vitis vinifera]              221   3e-55
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   220   6e-55
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   216   8e-54
ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   211   2e-52

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  231 bits (590), Expect = 2e-58
 Identities = 129/222 (58%), Positives = 142/222 (63%), Gaps = 7/222 (3%)
 Frame = -3

Query: 1132 SMPTIEISDLHVSTESHCAVCKEAFVLRTEAREMPCKHIYHSDCIIPWLTLRNSCPVCRH 953
            SMPTIEI   H+ TE HCAVCKEAF L +EAREMPCKHIYHSDCI+PWL+LRNSCPVCRH
Sbjct: 171  SMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRH 230

Query: 952  ELPTD---SADSNSNNPERSEPIEEESAAVGLTIWRLPGGGFAVXXXXXXXXXXXXXXEL 782
            ELPTD   + +S  +  E   P   E   VGLTIWRLPGGGFAV              EL
Sbjct: 231  ELPTDVPGTRNSPVSGNEALSPAPNEEETVGLTIWRLPGGGFAV--GRFSGGRRAGEREL 288

Query: 781  PVVYTEMDGGFNNNSGTPRRIMWESRRNSAGGESG--IGRVFRNMFSFFGRLR--PXXXX 614
            PVVYTEMDGGF NNSG PRRI W SRR S   ESG  +GR FRN+FSF GR R       
Sbjct: 289  PVVYTEMDGGF-NNSGAPRRISWASRR-SRSRESGGSLGRAFRNIFSFLGRFRSSSSSSS 346

Query: 613  XXXXXXXXXXXXXXXXXSVFGRMTRRRSRTWILDEQNGMSRW 488
                             SVF R  RRRSR W+L++Q+G SRW
Sbjct: 347  RSTSEPGSITRSHSHSSSVFSRYVRRRSRAWVLEDQSGNSRW 388


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  221 bits (562), Expect = 3e-55
 Identities = 126/218 (57%), Positives = 136/218 (62%), Gaps = 4/218 (1%)
 Frame = -3

Query: 1132 SMPTIEISDLHVSTESHCAVCKEAFVLRTEAREMPCKHIYHSDCIIPWLTLRNSCPVCRH 953
            SMPTIEI   H+ TE HCAVCKEAF L +EAREMPCKHIYHSDCI+PWL+LRNSCPVCRH
Sbjct: 287  SMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRH 346

Query: 952  ELPTDSADSNSNNPERSEPIEEESAAVGLTIWRLPGGGFAVXXXXXXXXXXXXXXELPVV 773
            ELPTD             P    S  VGLTIWRLPGGGFAV              ELPVV
Sbjct: 347  ELPTD------------VPGTRNSPTVGLTIWRLPGGGFAV--GRFSGGRRAGERELPVV 392

Query: 772  YTEMDGGFNNNSGTPRRIMWESRRNSAGGESG--IGRVFRNMFSFFGRLR--PXXXXXXX 605
            YTEMDGGF NNSG PRRI W SRR S   ESG  +GR FRN+FSF GR R          
Sbjct: 393  YTEMDGGF-NNSGAPRRISWASRR-SRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRST 450

Query: 604  XXXXXXXXXXXXXXSVFGRMTRRRSRTWILDEQNGMSR 491
                          SVF R  RRRSR W+L++Q+G SR
Sbjct: 451  SEPGSITRSHSHSSSVFSRYVRRRSRAWVLEDQSGNSR 488


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449527992|ref|XP_004170991.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score =  220 bits (560), Expect = 6e-55
 Identities = 116/218 (53%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
 Frame = -3

Query: 1132 SMPTIEISDLHVSTESHCAVCKEAFVLRTEAREMPCKHIYHSDCIIPWLTLRNSCPVCRH 953
            SMPTIEI + HV ++SHCAVCKEAF + TEAREMPCKHIYHS+CIIPWL++RNSCPVCRH
Sbjct: 168  SMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRH 227

Query: 952  ELPTDSADSNSNNPERSEPIEEESAAVGLTIWRLPGGGFAVXXXXXXXXXXXXXXELPVV 773
            ELP++         +R   ++EE+  VGLTIWRLPGGGFAV                P V
Sbjct: 228  ELPSERVSPAGGVSDR--VVDEET--VGLTIWRLPGGGFAVGRFSGGRLAGERDP--PAV 281

Query: 772  YTEMDGGFNNNSGTPRRIMWESRRNSAGGESGIGRVFRNMFSFFGRLR---PXXXXXXXX 602
            YTEMDGGFN N G PRR+ W SRR+      GIGR FRN+FSFFGR R            
Sbjct: 282  YTEMDGGFNGN-GVPRRVSWASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNE 340

Query: 601  XXXXXXXXXXXXXSVFGRMTRRRSRTWILDEQNGMSRW 488
                         SVF R  RR++R W+L+ QN   RW
Sbjct: 341  SESVSRSHSHSSSSVFSRYLRRQNRAWVLENQNENGRW 378


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  216 bits (550), Expect = 8e-54
 Identities = 123/211 (58%), Positives = 132/211 (62%), Gaps = 7/211 (3%)
 Frame = -3

Query: 1132 SMPTIEISDLHVSTESHCAVCKEAFVLRTEAREMPCKHIYHSDCIIPWLTLRNSCPVCRH 953
            SMPTIEI   H+ TE HCAVCKEAF L +EAREMPCKHIYHSDCI+PWL+LRNSCPVCRH
Sbjct: 281  SMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRH 340

Query: 952  ELPTD---SADSNSNNPERSEPIEEESAAVGLTIWRLPGGGFAVXXXXXXXXXXXXXXEL 782
            ELPTD   + +S  +  E   P   E   VGLTIWRLPGGGFAV              EL
Sbjct: 341  ELPTDVPGTRNSPVSGTEALSPAPNEEETVGLTIWRLPGGGFAV--GRFSGGRRAGEREL 398

Query: 781  PVVYTEMDGGFNNNSGTPRRIMWESRRNSAGGESG--IGRVFRNMFSFFGRLR--PXXXX 614
            PVVYTEMDGGF NNSG PRRI W SRR S   ESG  +GR FRN+FSF GR R       
Sbjct: 399  PVVYTEMDGGF-NNSGAPRRISWASRR-SRSRESGGSLGRAFRNIFSFLGRFRSSSSSSS 456

Query: 613  XXXXXXXXXXXXXXXXXSVFGRMTRRRSRTW 521
                             SVF R  RRRSR W
Sbjct: 457  RSTSEPGSITRSHSHSSSVFSRYVRRRSRAW 487


>ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  211 bits (538), Expect = 2e-52
 Identities = 108/208 (51%), Positives = 127/208 (61%)
 Frame = -3

Query: 1132 SMPTIEISDLHVSTESHCAVCKEAFVLRTEAREMPCKHIYHSDCIIPWLTLRNSCPVCRH 953
            SMPT+EI + HV T++HCAVCKE F L  EARE+PCKHIYHS+CI+PWL++RNSCPVCRH
Sbjct: 165  SMPTVEIGETHVETDAHCAVCKEVFELHAEARELPCKHIYHSECILPWLSMRNSCPVCRH 224

Query: 952  ELPTDSADSNSNNPERSEPIEEESAAVGLTIWRLPGGGFAVXXXXXXXXXXXXXXELPVV 773
            ELP+D         E   P + +  A+GLTIWRLPGGGFAV               LPVV
Sbjct: 225  ELPSDL--------ETRVPSQIDEEAIGLTIWRLPGGGFAV--GRFSGGRRTGESHLPVV 274

Query: 772  YTEMDGGFNNNSGTPRRIMWESRRNSAGGESGIGRVFRNMFSFFGRLRPXXXXXXXXXXX 593
            YTEMDGG N N G PRRI    R N      G GRVFRN FSFFGR+             
Sbjct: 275  YTEMDGGLNTNGGAPRRISRSVRSNRVRESRGFGRVFRNFFSFFGRI-GSRNSSSSSEHG 333

Query: 592  XXXXXXXXXXSVFGRMTRRRSRTWILDE 509
                      S+F R +RR SRTW++D+
Sbjct: 334  SVSRSRSHVSSMFNRSSRRHSRTWVMDD 361


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