BLASTX nr result
ID: Atractylodes21_contig00021004
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00021004 (218 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp... 108 4e-22 ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|2... 98 6e-19 ref|XP_002305824.1| predicted protein [Populus trichocarpa] gi|2... 98 8e-19 ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp... 95 7e-18 ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron sp... 94 9e-18 >ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic [Vitis vinifera] gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera] Length = 246 Score = 108 bits (270), Expect = 4e-22 Identities = 49/57 (85%), Positives = 54/57 (94%) Frame = -1 Query: 173 LRVSASLPEPNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMVDRISQEERIVMNT 3 L VSASLP+ NG+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEM+DRISQEE I++NT Sbjct: 33 LCVSASLPDANGIKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNT 89 >ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa] Length = 244 Score = 98.2 bits (243), Expect = 6e-19 Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 1/64 (1%) Frame = -1 Query: 191 NLKRNGLRVSASLPE-PNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMVDRISQEERI 15 NL L V ASLP+ NGVKVEYTPWLIVGLGNPG KYHGTRHNVGFEM+DRI+Q E + Sbjct: 24 NLVSVRLCVRASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGV 83 Query: 14 VMNT 3 +MNT Sbjct: 84 LMNT 87 >ref|XP_002305824.1| predicted protein [Populus trichocarpa] gi|222848788|gb|EEE86335.1| predicted protein [Populus trichocarpa] Length = 161 Score = 97.8 bits (242), Expect = 8e-19 Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 1/64 (1%) Frame = -1 Query: 191 NLKRNGLRVSASLPEP-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMVDRISQEERI 15 NL L V ASLP+ NGVKVEYTPWLIVGLGNPG KYHGTRHNVGFEM+DRI+Q E + Sbjct: 24 NLVSVRLCVRASLPDNGNGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGV 83 Query: 14 VMNT 3 +MNT Sbjct: 84 LMNT 87 >ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucumis sativus] gi|449519774|ref|XP_004166909.1| PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucumis sativus] Length = 249 Score = 94.7 bits (234), Expect = 7e-18 Identities = 44/68 (64%), Positives = 52/68 (76%) Frame = -1 Query: 206 SQNPSNLKRNGLRVSASLPEPNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMVDRISQ 27 S P R +R S+ + NG+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEM+D I+Q Sbjct: 25 STKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQ 84 Query: 26 EERIVMNT 3 + I+MNT Sbjct: 85 AQGILMNT 92 >ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like [Brachypodium distachyon] Length = 369 Score = 94.4 bits (233), Expect = 9e-18 Identities = 44/61 (72%), Positives = 48/61 (78%) Frame = -1 Query: 185 KRNGLRVSASLPEPNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMVDRISQEERIVMN 6 +R L V AS+P+P EYTPWLI GLGNPG KYHGTRHNVGFEMVDRI+Q E IVMN Sbjct: 152 RRTRLTVVASVPDPAARPAEYTPWLIAGLGNPGGKYHGTRHNVGFEMVDRIAQVEGIVMN 211 Query: 5 T 3 T Sbjct: 212 T 212