BLASTX nr result

ID: Atractylodes21_contig00020921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020921
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   198   6e-49
ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   191   8e-47
ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|2...   188   8e-46
ref|XP_002519400.1| peptide chain release factor, putative [Rici...   184   1e-44
ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-li...   184   2e-44

>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
           gi|297734721|emb|CBI16955.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  198 bits (504), Expect = 6e-49
 Identities = 96/137 (70%), Positives = 110/137 (80%)
 Frame = +3

Query: 228 SSSNNDGGKELLAMSDEKLLSQCEMDTYKSSGPGGQHRNKRETAVRLKHLPTGIVAQASE 407
           +SS+  G +E L +SDE+L+ QCEM T+KSSGPGGQHRNKRE+AVRLKHLPTGI+AQA E
Sbjct: 42  NSSSGSGSREFLGLSDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVE 101

Query: 408 DRSQHKNXXXXXXXXXXXXXXKVRNTIDLETYTPPPELLQVLPTKSTIRGSDCGPRIGPN 587
           DRSQHKN              KVRN+IDL+TY+PP ELLQ+LP KSTIR SDCGP+IGPN
Sbjct: 102 DRSQHKNRASALARLRTLLALKVRNSIDLDTYSPPLELLQILPAKSTIRTSDCGPQIGPN 161

Query: 588 NPKFVLGMQALLDLIFA 638
           NPKF LGM ALLDLIFA
Sbjct: 162 NPKFALGMLALLDLIFA 178


>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  191 bits (486), Expect = 8e-47
 Identities = 105/207 (50%), Positives = 130/207 (62%)
 Frame = +3

Query: 18  RPSFYMALYLVKSCVKFWPKTTALSPAPPILLRRFQLHFGIIKSNNTTSCSPNRTSSFHY 197
           +PS  + L L K+ + F          PP         F  + ++  +     R +++ +
Sbjct: 8   KPSLILTLRLNKTAISFSHHHPFRHSQPP---------FPFLNTSPISLPPTTRITNYTH 58

Query: 198 TTSVNKIPPVSSSNNDGGKELLAMSDEKLLSQCEMDTYKSSGPGGQHRNKRETAVRLKHL 377
               N    VS+      K  L +SDE+L+ QCEMDT+K+SGPGGQHRNKRE+AVRLKHL
Sbjct: 59  LWCSN-YTTVSTIEEGSEKCYLNLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHL 117

Query: 378 PTGIVAQASEDRSQHKNXXXXXXXXXXXXXXKVRNTIDLETYTPPPELLQVLPTKSTIRG 557
           PTGI+AQASEDRSQHKN              KVR T+DLE Y+PP ELLQ+LP KS+IRG
Sbjct: 118 PTGIIAQASEDRSQHKNRASAINRLRSLIALKVRKTVDLEAYSPPRELLQILPPKSSIRG 177

Query: 558 SDCGPRIGPNNPKFVLGMQALLDLIFA 638
           SDCG +IGPNNPKF  GMQALLDLIFA
Sbjct: 178 SDCGSQIGPNNPKFASGMQALLDLIFA 204


>ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|222870969|gb|EEF08100.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  188 bits (477), Expect = 8e-46
 Identities = 93/161 (57%), Positives = 115/161 (71%)
 Frame = +3

Query: 156 TTSCSPNRTSSFHYTTSVNKIPPVSSSNNDGGKELLAMSDEKLLSQCEMDTYKSSGPGGQ 335
           T      R   F+Y TS         +++  G   L ++D++L+ QCEMDT+K+SGPGGQ
Sbjct: 65  TAETPKKRLICFNYNTS---------ASHGNGTNYLELTDDELMRQCEMDTFKASGPGGQ 115

Query: 336 HRNKRETAVRLKHLPTGIVAQASEDRSQHKNXXXXXXXXXXXXXXKVRNTIDLETYTPPP 515
           HRNKRE+AVRLKHLPTGI+AQA EDRSQH N              +VRN++D+++YTP  
Sbjct: 116 HRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALLAIRVRNSLDIDSYTPRL 175

Query: 516 ELLQVLPTKSTIRGSDCGPRIGPNNPKFVLGMQALLDLIFA 638
           ELLQ+LP KSTIRGSDCGP+IGP NPKF+LGMQALLDLIFA
Sbjct: 176 ELLQILPLKSTIRGSDCGPQIGPKNPKFILGMQALLDLIFA 216


>ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis]
           gi|223541467|gb|EEF43017.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 185

 Score =  184 bits (467), Expect = 1e-44
 Identities = 86/118 (72%), Positives = 98/118 (83%)
 Frame = +3

Query: 285 LSQCEMDTYKSSGPGGQHRNKRETAVRLKHLPTGIVAQASEDRSQHKNXXXXXXXXXXXX 464
           + QCEMDTYK+SGPGGQHRNKRE+AVR+KHLPTGI++QA EDRSQHKN            
Sbjct: 1   MRQCEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNRASALRRLRTLL 60

Query: 465 XXKVRNTIDLETYTPPPELLQVLPTKSTIRGSDCGPRIGPNNPKFVLGMQALLDLIFA 638
             KVRN + L+ Y+PPPELLQ+LP KSTIRGSDCGP+IGPNNPKFVLGMQALLDL+FA
Sbjct: 61  ALKVRNAVYLDAYSPPPELLQILPPKSTIRGSDCGPQIGPNNPKFVLGMQALLDLVFA 118


>ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449526225|ref|XP_004170114.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 240

 Score =  184 bits (466), Expect = 2e-44
 Identities = 90/138 (65%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
 Frame = +3

Query: 228 SSSNNDG---GKELLAMSDEKLLSQCEMDTYKSSGPGGQHRNKRETAVRLKHLPTGIVAQ 398
           SSSN +    GK+ L +SDE+L+ QCEM T+K+SGPGGQHRNKRE+AVRLKH+PTGI+AQ
Sbjct: 55  SSSNANSVCNGKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQ 114

Query: 399 ASEDRSQHKNXXXXXXXXXXXXXXKVRNTIDLETYTPPPELLQVLPTKSTIRGSDCGPRI 578
           A EDRSQHKN              KVRN +DLE Y+PPPELLQ+LP KST+R  +CGP+I
Sbjct: 115 AVEDRSQHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQI 174

Query: 579 GPNNPKFVLGMQALLDLI 632
           GPNN KF+ GMQALLDLI
Sbjct: 175 GPNNSKFLPGMQALLDLI 192


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