BLASTX nr result

ID: Atractylodes21_contig00020896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020896
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-li...   202   2e-49
ref|XP_002317948.1| f-box family protein [Populus trichocarpa] g...   166   1e-38
ref|XP_002322044.1| f-box family protein [Populus trichocarpa] g...   157   6e-36
emb|CAN64066.1| hypothetical protein VITISV_041736 [Vitis vinifera]   122   2e-25
emb|CBI15353.3| unnamed protein product [Vitis vinifera]              103   1e-19

>ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera]
          Length = 291

 Score =  202 bits (513), Expect = 2e-49
 Identities = 122/277 (44%), Positives = 152/277 (54%), Gaps = 9/277 (3%)
 Frame = -3

Query: 1131 FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRXXXXXXXXXXXSDAAVR 952
            FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKR              A R
Sbjct: 41   FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSKAKSSSD------APR 94

Query: 951  KXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXXXXXASEVLSGINSTNSAPTLPNFQESSS 772
            +            SL                     +E +S   S+N+A TL  F+ES  
Sbjct: 95   ERKSNSHSSSESSSLTATTTAAATTAT---------TEAVSA-PSSNAASTLVGFRESRF 144

Query: 771  TGLLNIPQSSAPNPSFDPPLLDNTSVENNIFPEIGTFTSLITSSTTQLPLGFNMAADISP 592
                  PQS  PNP+F+ P L + S + NIFPEIG+FTSL+T S     LGFN++ DISP
Sbjct: 145  FA----PQS--PNPNFEMPTLLDHSSDGNIFPEIGSFTSLMTGSNDPAALGFNIS-DISP 197

Query: 591  FRLHHTRHIVENSIVNQHQWMHTDHTIGDDLKVQESSPLGFME---------LQNKTNDG 439
            F+        +  +    QW      + D+LK+QE +  GF++         LQN++N G
Sbjct: 198  FKY-------QEQVDQNQQWQQQQQKMSDELKMQEITA-GFLDQTVQVELSALQNRSNHG 249

Query: 438  VLGTEDWNHGADQALFDLTGTVDQSYWSQTQWDDHDH 328
               + DW    DQ +FDL G VDQ YW+Q+QW D+DH
Sbjct: 250  GFPSLDWQTSGDQGIFDLPGNVDQGYWTQSQWSDNDH 286


>ref|XP_002317948.1| f-box family protein [Populus trichocarpa]
            gi|222858621|gb|EEE96168.1| f-box family protein [Populus
            trichocarpa]
          Length = 329

 Score =  166 bits (419), Expect = 1e-38
 Identities = 115/295 (38%), Positives = 137/295 (46%), Gaps = 27/295 (9%)
 Frame = -3

Query: 1131 FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRXXXXXXXXXXXSDAAVR 952
            FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKR            D    
Sbjct: 47   FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSRPKQNTPITTCDTITA 106

Query: 951  KXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXXXXXASEVLSGINSTNSAPTLPNFQESS- 775
                                                S  L+  N+TN+  T       S 
Sbjct: 107  SSTTPQ---------ELQEQHQQRDHKSSDSHSSSESSSLTATNNTNANTTAEAVSALSV 157

Query: 774  ----STGLLN-------IPQSSAPNPSFDPPLLDNTSVENNIFPEIGTFTSLITSSTTQL 628
                S  LLN        P  +  NPSF+P LL+  S +  IF EIG+FTSLITS+    
Sbjct: 158  SSVVSNNLLNGIVESKIFPHGNV-NPSFEPSLLEQGS-DCGIFSEIGSFTSLITSTNDLF 215

Query: 627  PLGFNMAADISPFRLHHTRHIVENSIVNQHQWMH------------TDHTIGDDLKVQES 484
                 M+    P +     H V+++  NQ QW +             D T+  +L    S
Sbjct: 216  GFSNMMSQHQPPHQQQGLEHHVQHN-QNQQQWQNHQQQEMTGGGGLIDQTVHVELSALPS 274

Query: 483  SPLGFMELQNKTNDGVLGTEDWNHGA-DQA--LFDLTGTVDQSYWSQTQWDDHDH 328
            S         K +DG  G  DW  G+ DQA  LFDL   VDQ+YWSQ+QW+D DH
Sbjct: 275  S------RSTKNDDGEFGALDWQLGSGDQATSLFDLPNAVDQAYWSQSQWNDQDH 323


>ref|XP_002322044.1| f-box family protein [Populus trichocarpa]
            gi|118488417|gb|ABK96024.1| unknown [Populus trichocarpa]
            gi|222869040|gb|EEF06171.1| f-box family protein [Populus
            trichocarpa]
          Length = 321

 Score =  157 bits (396), Expect = 6e-36
 Identities = 116/283 (40%), Positives = 135/283 (47%), Gaps = 18/283 (6%)
 Frame = -3

Query: 1131 FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRXXXXXXXXXXXSDAAVR 952
            FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKR           SDA   
Sbjct: 47   FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSKLKQNTPSTTSDAITT 106

Query: 951  KXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXXXXXASEVLSGINSTNSAPTLPNFQ---- 784
                                                S  L+  N+TN+   +        
Sbjct: 107  SSTRPQ---------ELQEQHQRRDHMSSNSHSSSESSSLTATNNTNANTAVEAVSALSV 157

Query: 783  ESSSTGLLN------IPQSSAPNPSFDPPLLDNTSVENNIFPEIGTFTSLITSSTTQLPL 622
             S S  LLN      I      NPSF+P LL+  S +  IF EIG+FTSLIT ST  L  
Sbjct: 158  NSVSNNLLNGIVESKIFPRGDMNPSFEPALLEQGS-DCGIFSEIGSFTSLIT-STNDLSF 215

Query: 621  GFNMAADISPFRLHHTRHIVENSIVNQHQW--MHTDHTIG---DDLKVQESSPLGFMELQ 457
            GF+   +    +     H V+N+  NQ QW   H + T G   D     E S L      
Sbjct: 216  GFSNTTNQQ--QQQGLEHHVQNN-QNQQQWQNQHQEMTGGGLIDQTIHAELSALPSSSRS 272

Query: 456  NKTNDGVLGTEDWNHGA-DQA--LFDLTGTVDQSYWSQTQWDD 337
             +   G  G  DW  G+ DQA   F L  TVDQ+YWSQ+QW+D
Sbjct: 273  TENTGGGFGALDWQLGSGDQAGGFFYLPNTVDQAYWSQSQWND 315


>emb|CAN64066.1| hypothetical protein VITISV_041736 [Vitis vinifera]
          Length = 286

 Score =  122 bits (305), Expect = 2e-25
 Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 9/173 (5%)
 Frame = -3

Query: 819 STNSAPTLPNFQESSSTGLLNIPQSSAPNPSFDPPLLDNTSVENNIFPEIGTFTSLITSS 640
           +T +   L  F+ES        PQS  PNP+F+ P L + S ++NIFPEIG+FTSL+T S
Sbjct: 124 TTEAVSALVGFRESRFFP----PQS--PNPNFEMPTLLDHSSDSNIFPEIGSFTSLMTGS 177

Query: 639 TTQLPLGFNMAADISPFRLHHTRHIVENSIVNQHQWMHTDHTIGDDLKVQESSPLGFME- 463
                LGFN++ DISPF+        +  +    QW      + D+LK+QE S  GF++ 
Sbjct: 178 NDPAALGFNIS-DISPFKY-------QEQVDQNQQWRQQQQKMSDELKMQEISA-GFLDQ 228

Query: 462 --------LQNKTNDGVLGTEDWNHGADQALFDLTGTVDQSYWSQTQWDDHDH 328
                   LQN++N G   + DW    DQ +FDL G VDQ YW+Q+QW D+DH
Sbjct: 229 IVQVELSALQNRSNHGGFPSLDWQTSGDQGIFDLPGNVDQGYWTQSQWSDNDH 281


>emb|CBI15353.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  103 bits (256), Expect = 1e-19
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -3

Query: 1131 FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKR 1003
            FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKR
Sbjct: 41   FCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKR 83



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 37/111 (33%), Positives = 54/111 (48%)
 Frame = -3

Query: 678 PEIGTFTSLITSSTTQLPLGFNMAADISPFRLHHTRHIVENSIVNQHQWMHTDHTIGDDL 499
           P     ++L+T S     LGFN++ DISPF+ +  + I    +         D T+  +L
Sbjct: 128 PSSNAASTLMTGSNDPAALGFNIS-DISPFK-YQEQEITAGFL---------DQTVQVEL 176

Query: 498 KVQESSPLGFMELQNKTNDGVLGTEDWNHGADQALFDLTGTVDQSYWSQTQ 346
                       LQN++N G   + DW    DQ +FDL G VDQ YW+Q+Q
Sbjct: 177 SA----------LQNRSNHGGFPSLDWQTSGDQGIFDLPGNVDQGYWTQSQ 217


Top