BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020864
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   117   3e-24
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...   115   7e-24
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]     115   7e-24
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     115   9e-24
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...   115   1e-23

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  117 bits (292), Expect = 3e-24
 Identities = 53/122 (43%), Positives = 81/122 (66%)
 Frame = +1

Query: 1    RYYGPFLIVEKVGSVAYKLQLPATAKIHPIFHVSLLKRAIGSHTAEPSLPPGMEVDSSTP 180
            R+YGPF +++++G+ AYKLQLP ++KIHP+FHVSLLK+ +G+    P++PP ++VD    
Sbjct: 1480 RFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELV 1539

Query: 181  TRPLKCLSTRTLTKQGT*TQQWLIQWENSTADDATWEDASAIQTQFPDFRLEDKPDLPDS 360
              P + L  R + +      + LI+W+   A +ATWED S I  +FP F LEDK ++  +
Sbjct: 1540 VEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKVNVWGA 1599

Query: 361  GI 366
            GI
Sbjct: 1600 GI 1601


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score =  115 bits (289), Expect = 7e-24
 Identities = 54/110 (49%), Positives = 70/110 (63%)
 Frame = +1

Query: 1    RYYGPFLIVEKVGSVAYKLQLPATAKIHPIFHVSLLKRAIGSHTAEPSLPPGMEVDSSTP 180
            ++YGPF ++EK+G VAYKLQLP  A IHP+FHVS LK+ +G         P +  D +  
Sbjct: 1050 KFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVK 1109

Query: 181  TRPLKCLSTRTLTKQGT*TQQWLIQWENSTADDATWEDASAIQTQFPDFR 330
            T PL  L+ R + +Q     QWLI WEN T +DATWE+A+ IQ  FP FR
Sbjct: 1110 TEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFR 1159


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score =  115 bits (289), Expect = 7e-24
 Identities = 54/110 (49%), Positives = 70/110 (63%)
 Frame = +1

Query: 1    RYYGPFLIVEKVGSVAYKLQLPATAKIHPIFHVSLLKRAIGSHTAEPSLPPGMEVDSSTP 180
            ++YGPF ++EK+G VAYKLQLP  A IHP+FHVS LK+ +G         P +  D +  
Sbjct: 1136 KFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVK 1195

Query: 181  TRPLKCLSTRTLTKQGT*TQQWLIQWENSTADDATWEDASAIQTQFPDFR 330
            T PL  L+ R + +Q     QWLI WEN T +DATWE+A+ IQ  FP FR
Sbjct: 1196 TEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQATFPHFR 1245


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  115 bits (288), Expect = 9e-24
 Identities = 52/109 (47%), Positives = 70/109 (64%)
 Frame = +1

Query: 1    RYYGPFLIVEKVGSVAYKLQLPATAKIHPIFHVSLLKRAIGSHTAEPSLPPGMEVDSSTP 180
            ++YGPF +++K+G +AYKLQLP  A+IHP+FHVS LK+ +G H    S  P +  D    
Sbjct: 1365 KFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIK 1424

Query: 181  TRPLKCLSTRTLTKQGT*TQQWLIQWENSTADDATWEDASAIQTQFPDF 327
            T PL  L  R + ++G    QWLI W+N +  +ATWEDAS IQ  FP F
Sbjct: 1425 TEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSF 1473


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score =  115 bits (287), Expect = 1e-23
 Identities = 53/109 (48%), Positives = 68/109 (62%)
 Frame = +1

Query: 1    RYYGPFLIVEKVGSVAYKLQLPATAKIHPIFHVSLLKRAIGSHTAEPSLPPGMEVDSSTP 180
            ++YGPF ++EK+G VAYKLQLP  A IHP+FHVS LK+ +G      S  P M  D    
Sbjct: 1403 KFYGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIK 1462

Query: 181  TRPLKCLSTRTLTKQGT*TQQWLIQWENSTADDATWEDASAIQTQFPDF 327
            T+P+  L  R + + G    QWLI WEN    DATWEDA+ IQ+ +P F
Sbjct: 1463 TQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWEDAAVIQSMYPTF 1511