BLASTX nr result

ID: Atractylodes21_contig00020834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020834
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595517.1| Pentatricopeptide repeat-containing protein ...    81   8e-14
gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-framesh...    81   8e-14
ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts...    80   2e-13
emb|CBI31526.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...    77   1e-12

>ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484565|gb|AES65768.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1705

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/64 (65%), Positives = 43/64 (67%)
 Frame = +3

Query: 3    QTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNLPVGWSQSG 182
            QTKQM IPSD SLVQST            DIKRL+LEYNDREEEELN LG  P  W QSG
Sbjct: 1133 QTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQPSNWMQSG 1192

Query: 183  GGRV 194
            G RV
Sbjct: 1193 GNRV 1196


>gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
            [Medicago truncatula]
          Length = 1212

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/64 (65%), Positives = 43/64 (67%)
 Frame = +3

Query: 3    QTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNLPVGWSQSG 182
            QTKQM IPSD SLVQST            DIKRL+LEYNDREEEELN LG  P  W QSG
Sbjct: 1113 QTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQPSNWMQSG 1172

Query: 183  GGRV 194
            G RV
Sbjct: 1173 GNRV 1176


>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis vinifera]
          Length = 1222

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/64 (60%), Positives = 43/64 (67%)
 Frame = +3

Query: 3    QTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNLPVGWSQSG 182
            QTKQM IP DCSLVQST            DIKRL+LEYNDREEEELN +G   + W+ SG
Sbjct: 1126 QTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQTMSWTPSG 1185

Query: 183  GGRV 194
            G RV
Sbjct: 1186 GSRV 1189


>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/64 (60%), Positives = 43/64 (67%)
 Frame = +3

Query: 3    QTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNLPVGWSQSG 182
            QTKQM IP DCSLVQST            DIKRL+LEYNDREEEELN +G   + W+ SG
Sbjct: 1097 QTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQTMSWTPSG 1156

Query: 183  GGRV 194
            G RV
Sbjct: 1157 GSRV 1160


>ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
            2-like, partial [Cucumis sativus]
          Length = 1144

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/64 (57%), Positives = 44/64 (68%)
 Frame = +3

Query: 3    QTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNLPVGWSQSG 182
            QTK+M IP DC+L+QST            DIKRL+LEYNDREEEELN LG+  + W Q+G
Sbjct: 1046 QTKKMYIPRDCTLLQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGLGSQTMNWMQTG 1105

Query: 183  GGRV 194
            G RV
Sbjct: 1106 GNRV 1109


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