BLASTX nr result

ID: Atractylodes21_contig00020817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020817
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB71567.1| RTL5-like protein [Solanum chacoense]                   79   9e-13
ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|2...    73   9e-11
ref|XP_002520543.1| conserved hypothetical protein [Ricinus comm...    72   1e-10
ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263...    70   4e-10
emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]    70   4e-10

>gb|AEB71567.1| RTL5-like protein [Solanum chacoense]
          Length = 109

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 48/119 (40%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
 Frame = +3

Query: 99  EHCMDKKWKLSKEDPCNHXXXXXXXXXXXXXXXXTKSPLFXXXXXXXXXXXXXXXXXXXX 278
           E+ MD+KWKLSKEDP N+                +KS L                     
Sbjct: 2   EYYMDEKWKLSKEDPNNNSYNSS-----------SKSSLRRSYSQHCPISSDPPLPRSYS 50

Query: 279 XXXXXXCPSDLQRSSSQKCANFTRKCGSLAKEQKARFYIVKRCVTMLVNWK---KHGDS 446
                   S L +SSSQ+ +NF  KC ++AKEQKA+FYIVKRC+ MLV W    KHGDS
Sbjct: 51  QKTSSSSKSRLSKSSSQRSSNFKSKCSTMAKEQKAKFYIVKRCIAMLVRWNKHDKHGDS 109


>ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|222850573|gb|EEE88120.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = +3

Query: 297 CPSDLQRSSSQKCANFTRKCGSLAKEQKARFYIVKRCVTMLVNWKKHGDS 446
           CP  L RS SQK ++ +RKC SLAKEQKARFYI++RCV MLV W KHGDS
Sbjct: 44  CP--LPRSCSQKSSSISRKCSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 91


>ref|XP_002520543.1| conserved hypothetical protein [Ricinus communis]
           gi|223540385|gb|EEF41956.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = +3

Query: 297 CPSDLQRSSSQKCANFTRKCGSLAKEQKARFYIVKRCVTMLVNWKKHGDS 446
           CP  L RS SQK ++ +RKC SLAKEQKARFYI++RCV MLV W KHGDS
Sbjct: 56  CP--LPRSYSQKSSSISRKCSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 103


>ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263265 [Vitis vinifera]
          Length = 83

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 31/48 (64%), Positives = 40/48 (83%)
 Frame = +3

Query: 303 SDLQRSSSQKCANFTRKCGSLAKEQKARFYIVKRCVTMLVNWKKHGDS 446
           S L R+SSQ+  +FTRKC SL KEQ+ARFYIV+RCVTML+ W+++ DS
Sbjct: 36  SPLMRNSSQRRCSFTRKCASLVKEQRARFYIVRRCVTMLICWREYSDS 83


>emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]
          Length = 82

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 31/48 (64%), Positives = 40/48 (83%)
 Frame = +3

Query: 303 SDLQRSSSQKCANFTRKCGSLAKEQKARFYIVKRCVTMLVNWKKHGDS 446
           S L R+SSQ+  +FTRKC SL KEQ+ARFYIV+RCVTML+ W+++ DS
Sbjct: 35  SPLMRNSSQRRCSFTRKCASLVKEQRARFYIVRRCVTMLICWREYSDS 82


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