BLASTX nr result

ID: Atractylodes21_contig00020813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020813
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase...    70   2e-10
ref|XP_002529793.1| lipoate-protein ligase B, putative [Ricinus ...    67   2e-09
ref|NP_001067184.1| Os12g0596000 [Oryza sativa Japonica Group] g...    65   7e-09
ref|XP_003575534.1| PREDICTED: LOW QUALITY PROTEIN: putative lip...    65   7e-09
ref|XP_003571039.1| PREDICTED: putative lipoyltransferase-like p...    65   7e-09

>ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase family-like [Vitis
           vinifera] gi|296086674|emb|CBI32309.3| unnamed protein
           product [Vitis vinifera]
          Length = 290

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
 Frame = -3

Query: 305 IVPCGIRDRGVGSIKRLLI---GSNETSSTSGYHVDDGKLVDIAHESLLKEFCEVFQVEL 135
           IVPCGIR+R +GSIK +L     SN   ++   ++DD +L+DI H+SL+KEF EVFQ+EL
Sbjct: 223 IVPCGIRNRKIGSIKGILGEFGSSNRCGASDINYIDDFQLIDITHKSLIKEFSEVFQLEL 282

Query: 134 CHQPVSLL 111
             +P+S+L
Sbjct: 283 ALKPISML 290


>ref|XP_002529793.1| lipoate-protein ligase B, putative [Ricinus communis]
           gi|223530737|gb|EEF32607.1| lipoate-protein ligase B,
           putative [Ricinus communis]
          Length = 303

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
 Frame = -3

Query: 305 IVPCGIRDRGVGSIKRLLIGSNETSSTSGYH------VDDGKLVDIAHESLLKEFCEVFQ 144
           IVPCGIR+R VGSIK LL    +  S +G H      +DD KL+DI  +SL++EF EVFQ
Sbjct: 217 IVPCGIRNRKVGSIKGLL---QKVQSCNGRHTIDMPQLDDLKLIDITCKSLIREFSEVFQ 273

Query: 143 VELCHQPVSLLRFPAKQH*SCLLAMN 66
           +++CH+  S + F  K+     L  N
Sbjct: 274 LKICHKTTSDVEFMEKKPEKAYLVEN 299


>ref|NP_001067184.1| Os12g0596000 [Oryza sativa Japonica Group]
           gi|77556397|gb|ABA99193.1| lipoate-protein ligase B
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113649691|dbj|BAF30203.1| Os12g0596000 [Oryza
           sativa Japonica Group] gi|125579951|gb|EAZ21097.1|
           hypothetical protein OsJ_36739 [Oryza sativa Japonica
           Group] gi|215715362|dbj|BAG95113.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 305

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = -3

Query: 305 IVPCGIRDRGVGSIKRLLIGSNETSSTSGYHVDDGKLVDIAHESLLKEFCEVFQVELCHQ 126
           IVPCGI+DRGVGSIK +L       ++ G  +D+  L+D A+ +LLKEF EVFQ+ L H 
Sbjct: 239 IVPCGIKDRGVGSIKEIL-----QIASDGKEIDETALIDKAYRTLLKEFAEVFQLSLYHN 293

Query: 125 P 123
           P
Sbjct: 294 P 294


>ref|XP_003575534.1| PREDICTED: LOW QUALITY PROTEIN: putative lipoyltransferase-like
           protein, chloroplastic-like [Brachypodium distachyon]
          Length = 299

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/61 (52%), Positives = 45/61 (73%)
 Frame = -3

Query: 305 IVPCGIRDRGVGSIKRLLIGSNETSSTSGYHVDDGKLVDIAHESLLKEFCEVFQVELCHQ 126
           IVPCGI+DRGVGSIK +L       ++SG  +D+  L+D+A++SL+KEF EVFQ+ L  +
Sbjct: 237 IVPCGIKDRGVGSIKEIL-----QKASSGRDIDEAVLMDLAYKSLIKEFAEVFQLSLDLR 291

Query: 125 P 123
           P
Sbjct: 292 P 292


>ref|XP_003571039.1| PREDICTED: putative lipoyltransferase-like protein,
           chloroplastic-like [Brachypodium distachyon]
          Length = 299

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/61 (52%), Positives = 45/61 (73%)
 Frame = -3

Query: 305 IVPCGIRDRGVGSIKRLLIGSNETSSTSGYHVDDGKLVDIAHESLLKEFCEVFQVELCHQ 126
           IVPCGI+DRGVGSIK +L       ++SG  +D+  L+D+A++SL+KEF EVFQ+ L  +
Sbjct: 237 IVPCGIKDRGVGSIKEIL-----QKASSGRDIDEAVLMDLAYKSLIKEFAEVFQLSLDLR 291

Query: 125 P 123
           P
Sbjct: 292 P 292


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