BLASTX nr result

ID: Atractylodes21_contig00020746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020746
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804...   143   9e-32
gb|AFK36285.1| unknown [Medicago truncatula]                          139   1e-30
ref|XP_002270052.1| PREDICTED: uncharacterized protein LOC100261...   139   1e-30
ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 ...   139   1e-30
ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791...   138   3e-30

>ref|XP_003541338.1| PREDICTED: uncharacterized protein LOC100804021 [Glycine max]
          Length = 184

 Score =  143 bits (360), Expect = 9e-32
 Identities = 76/114 (66%), Positives = 84/114 (73%), Gaps = 2/114 (1%)
 Frame = +3

Query: 483 QSRKRRKHGDEDSQRAAAVVSEFVDGIVKEKQQQKNSKDVEMVEDDAGGEMDANE--IEM 656
           + R RR   +E+ +     VS+FVDGIVKE QQQK  KD      D GGE + NE  +EM
Sbjct: 76  RKRHRRDSTEEEHKETKKAVSDFVDGIVKE-QQQKQQKD----NGDGGGEAEGNEDELEM 130

Query: 657 MKMMGIPVGFDSTKGKPVEGNDVSGIRAVTKRQPRQYMNRRGGFNRPLPAEVNR 818
           MKM GIP GFDSTKGKPV G DVSG+RAVTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 131 MKMFGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 184


>gb|AFK36285.1| unknown [Medicago truncatula]
          Length = 186

 Score =  139 bits (351), Expect = 1e-30
 Identities = 74/115 (64%), Positives = 85/115 (73%), Gaps = 5/115 (4%)
 Frame = +3

Query: 489 RKRRKHGDEDSQ-----RAAAVVSEFVDGIVKEKQQQKNSKDVEMVEDDAGGEMDANEIE 653
           RKR +    D +         VVS+FVDGI KE+QQQK  ++ E V+      ++ +EIE
Sbjct: 78  RKRHRRDSVDDEPKEHKETKKVVSDFVDGIAKEQQQQKQKENGEEVD------VNEDEIE 131

Query: 654 MMKMMGIPVGFDSTKGKPVEGNDVSGIRAVTKRQPRQYMNRRGGFNRPLPAEVNR 818
           MMKMMGIPVGFDSTKGKPV G DVSG+RAVTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 132 MMKMMGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_002270052.1| PREDICTED: uncharacterized protein LOC100261636 [Vitis vinifera]
          Length = 202

 Score =  139 bits (351), Expect = 1e-30
 Identities = 73/115 (63%), Positives = 87/115 (75%), Gaps = 3/115 (2%)
 Frame = +3

Query: 483 QSRKRRKHGDEDSQRAAAVVSEFVDGIVKEKQQQKNSKDVEMVEDDAGG---EMDANEIE 653
           + R RR   +E  ++ AAVVS+FVDGI KE+Q+Q+ + +      D GG   EMDA+EIE
Sbjct: 92  RKRHRRGEDEEKERQRAAVVSDFVDGIAKEQQKQRGTSE----GGDVGGGDAEMDADEIE 147

Query: 654 MMKMMGIPVGFDSTKGKPVEGNDVSGIRAVTKRQPRQYMNRRGGFNRPLPAEVNR 818
           +MK MGIP  FDSTKGKPV G DVSG+R+VTKR PRQYMNRRGGFNRPLPAE NR
Sbjct: 148 LMKKMGIPCTFDSTKGKPVPGADVSGVRSVTKRLPRQYMNRRGGFNRPLPAERNR 202


>ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula] gi|355511149|gb|AES92291.1| U4/U6.U5 small
           nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula]
          Length = 186

 Score =  139 bits (351), Expect = 1e-30
 Identities = 74/115 (64%), Positives = 85/115 (73%), Gaps = 5/115 (4%)
 Frame = +3

Query: 489 RKRRKHGDEDSQ-----RAAAVVSEFVDGIVKEKQQQKNSKDVEMVEDDAGGEMDANEIE 653
           RKR +    D +         VVS+FVDGI KE+QQQK  ++ E V+      ++ +EIE
Sbjct: 78  RKRHRRDSVDDEPKEHKETKKVVSDFVDGIAKEQQQQKQKENGEEVD------VNEDEIE 131

Query: 654 MMKMMGIPVGFDSTKGKPVEGNDVSGIRAVTKRQPRQYMNRRGGFNRPLPAEVNR 818
           MMKMMGIPVGFDSTKGKPV G DVSG+RAVTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 132 MMKMMGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_003549396.1| PREDICTED: uncharacterized protein LOC100791549 [Glycine max]
          Length = 182

 Score =  138 bits (347), Expect = 3e-30
 Identities = 72/112 (64%), Positives = 84/112 (75%)
 Frame = +3

Query: 483 QSRKRRKHGDEDSQRAAAVVSEFVDGIVKEKQQQKNSKDVEMVEDDAGGEMDANEIEMMK 662
           + R RR   +ED +     VS+FVDGIVKE+QQ++N    +  E +A G  D  E+E+MK
Sbjct: 76  RKRHRRDSAEEDHKETKKAVSDFVDGIVKEQQQKENG---DGGEGEAEGSED--ELEIMK 130

Query: 663 MMGIPVGFDSTKGKPVEGNDVSGIRAVTKRQPRQYMNRRGGFNRPLPAEVNR 818
           M GIP GFDSTKGKPV G DVSG+RAVTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 131 MFGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 182


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