BLASTX nr result

ID: Atractylodes21_contig00020736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020736
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25992.3| unnamed protein product [Vitis vinifera]              214   1e-53
ref|XP_002528776.1| signal recognition particle 19 kD protein, p...   213   2e-53
emb|CBI25945.3| unnamed protein product [Vitis vinifera]              210   1e-52
ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kD...   209   2e-52
ref|XP_002519304.1| signal recognition particle 19 kD protein, p...   209   3e-52

>emb|CBI25992.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  214 bits (544), Expect = 1e-53
 Identities = 99/128 (77%), Positives = 113/128 (88%)
 Frame = +2

Query: 98  RLLTGTMDGETPNFKKWNILYPVYINSKKTIAEGRRICAAKACENPTAVEIGDCCSHLKV 277
           R+L G MDGE PN KKW + YPVYINSKKTIAEGRR+  +KACENPT VEIGDCCSHLK+
Sbjct: 72  RILIGDMDGEVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKL 131

Query: 278 PFAIELDKAYPRDFMQVGRVRFKLKRSDGTLYNPAIASKKQLMLYVAELVPRHPGRVKKQ 457
           PFAIE+DKAYPRDFMQ GRVR  LK+ DGTLYNPAI+S+K+LM +VAELVPRHPGRVKKQ
Sbjct: 132 PFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLYNPAISSRKELMRHVAELVPRHPGRVKKQ 191

Query: 458 EPAALTST 481
           EPA+ ++T
Sbjct: 192 EPASTSNT 199


>ref|XP_002528776.1| signal recognition particle 19 kD protein, putative [Ricinus
           communis] gi|223531779|gb|EEF33598.1| signal recognition
           particle 19 kD protein, putative [Ricinus communis]
          Length = 136

 Score =  213 bits (542), Expect = 2e-53
 Identities = 100/123 (81%), Positives = 110/123 (89%)
 Frame = +2

Query: 119 DGETPNFKKWNILYPVYINSKKTIAEGRRICAAKACENPTAVEIGDCCSHLKVPFAIELD 298
           DG  PN KKW +LYPVYINSKKTIA+GRRIC +KACENPT VEIGDCCSHLK+PFAIE+D
Sbjct: 3   DGSVPNIKKWVVLYPVYINSKKTIAQGRRICTSKACENPTCVEIGDCCSHLKLPFAIEID 62

Query: 299 KAYPRDFMQVGRVRFKLKRSDGTLYNPAIASKKQLMLYVAELVPRHPGRVKKQEPAALTS 478
           KAYPRDFMQ+GRVR  LKR DGTLYNPAI ++KQLML+VAELVPRHPGR KKQEPA+ TS
Sbjct: 63  KAYPRDFMQIGRVRVLLKRGDGTLYNPAIPTRKQLMLHVAELVPRHPGRTKKQEPAS-TS 121

Query: 479 TAG 487
            AG
Sbjct: 122 NAG 124


>emb|CBI25945.3| unnamed protein product [Vitis vinifera]
          Length = 169

 Score =  210 bits (535), Expect = 1e-52
 Identities = 98/128 (76%), Positives = 110/128 (85%)
 Frame = +2

Query: 98  RLLTGTMDGETPNFKKWNILYPVYINSKKTIAEGRRICAAKACENPTAVEIGDCCSHLKV 277
           R+L G MDGE PN KKW + YPVYINSKKTIAEGRR+  +KACENPT  EIGDCCSHLK+
Sbjct: 29  RILIGDMDGEVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKL 88

Query: 278 PFAIELDKAYPRDFMQVGRVRFKLKRSDGTLYNPAIASKKQLMLYVAELVPRHPGRVKKQ 457
           PFAIE+DKAYPRDFMQ GRVR  LK+ DGTLYNPAI+S K LM +VAELVPRHPGRVKKQ
Sbjct: 89  PFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLYNPAISSHKDLMRHVAELVPRHPGRVKKQ 148

Query: 458 EPAALTST 481
           EPA+ ++T
Sbjct: 149 EPASTSNT 156


>ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
           1 [Cucumis sativus] gi|449460341|ref|XP_004147904.1|
           PREDICTED: signal recognition particle 19 kDa
           protein-like isoform 2 [Cucumis sativus]
          Length = 135

 Score =  209 bits (533), Expect = 2e-52
 Identities = 98/125 (78%), Positives = 109/125 (87%)
 Frame = +2

Query: 116 MDGETPNFKKWNILYPVYINSKKTIAEGRRICAAKACENPTAVEIGDCCSHLKVPFAIEL 295
           MDGE PN K+W +LYP+YINSKKTIAEGRRI  +KACENPT VEIGDCC HLK+PFAIE+
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEI 60

Query: 296 DKAYPRDFMQVGRVRFKLKRSDGTLYNPAIASKKQLMLYVAELVPRHPGRVKKQEPAALT 475
           DKAYPRDFMQ GRVR  LK+ DGTL NPAI S+KQLML +AELVPRHPGR KKQEPA+ +
Sbjct: 61  DKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGRTKKQEPASSS 120

Query: 476 STAGP 490
           STAGP
Sbjct: 121 STAGP 125


>ref|XP_002519304.1| signal recognition particle 19 kD protein, putative [Ricinus
           communis] gi|223541619|gb|EEF43168.1| signal recognition
           particle 19 kD protein, putative [Ricinus communis]
          Length = 136

 Score =  209 bits (532), Expect = 3e-52
 Identities = 99/123 (80%), Positives = 108/123 (87%)
 Frame = +2

Query: 119 DGETPNFKKWNILYPVYINSKKTIAEGRRICAAKACENPTAVEIGDCCSHLKVPFAIELD 298
           DG  PN KKW +LYPVYINSKKTIA+GRRIC  KACENPT VEIGDCCSHLK+PFAIE+D
Sbjct: 3   DGSIPNIKKWVVLYPVYINSKKTIAQGRRICTTKACENPTCVEIGDCCSHLKLPFAIEID 62

Query: 299 KAYPRDFMQVGRVRFKLKRSDGTLYNPAIASKKQLMLYVAELVPRHPGRVKKQEPAALTS 478
           KAYPRDFMQ+GRVR  LKR DGTLYNPAI ++KQLML+VAELVPRHPGR KKQE A+ TS
Sbjct: 63  KAYPRDFMQIGRVRVLLKREDGTLYNPAIPTRKQLMLHVAELVPRHPGRTKKQESAS-TS 121

Query: 479 TAG 487
            AG
Sbjct: 122 NAG 124


Top