BLASTX nr result

ID: Atractylodes21_contig00020718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020718
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81870.1| unknown [Solanum tuberosum]                            301   2e-79
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati...   297   3e-78
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|2...   294   4e-77
ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|2...   293   5e-77
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei...   286   8e-75

>gb|ABA81870.1| unknown [Solanum tuberosum]
          Length = 286

 Score =  301 bits (771), Expect = 2e-79
 Identities = 172/287 (59%), Positives = 191/287 (66%), Gaps = 11/287 (3%)
 Frame = +2

Query: 71  MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 250
           MVRLTADLIWKSPHFFNA+RERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1   MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60

Query: 251 PNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEIDPLASLPKLQYLSL 430
           P LNRLGTLL             GEFLPKLH+            EIDPLASLPKL++LSL
Sbjct: 61  PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL 120

Query: 431 LDNNITKKPNYRLYVIHKLKALRLLDFKKVKQKERIXXXXXXXXXXXXXXXXXXXXXTFX 610
           L+NNITK+PNYRLYVIHKLK+LRLLDF+KVKQKER+                     T  
Sbjct: 121 LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKERLEASKLFASQEAEEQVKKESVKT-V 179

Query: 611 XXXXXXXXXXXXXXXXXXXXXXTPEQIIAIKAAIVNSQTLEEVARLEKALQSGQVPADLN 790
                                 TPEQIIAIKAAIVNSQTLEEVARLE+AL+SGQ+PADLN
Sbjct: 180 PVEVAVPAEEPKEAQASKPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 239

Query: 791 IG---------NTKNNDMATDGDKEA--AVDGSSKQEDDAPADMDQE 898
           IG         + K + M TD D +A  A +   +Q+ D P DM+QE
Sbjct: 240 IGDHDVTAKKEDAKEDKMVTDSDDKANKAEENVPEQKPDGPTDMEQE 286


>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
           gi|223548673|gb|EEF50164.1| U2 small nuclear
           ribonucleoprotein A, putative [Ricinus communis]
          Length = 287

 Score =  297 bits (761), Expect = 3e-78
 Identities = 169/287 (58%), Positives = 188/287 (65%), Gaps = 11/287 (3%)
 Frame = +2

Query: 71  MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 250
           MVRLTADLIWKSPHFFNA++ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN 
Sbjct: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 251 PNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEIDPLASLPKLQYLSL 430
           P L RLGTLL             GEFLPKLH+            EIDPLASLPKLQ+LSL
Sbjct: 61  PYLTRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSL 120

Query: 431 LDNNITKKPNYRLYVIHKLKALRLLDFKKVKQKERIXXXXXXXXXXXXXXXXXXXXXTFX 610
           LDN+ITKKPNYRLY+IHKLK+LR+LDFKKVK KER+                     TF 
Sbjct: 121 LDNSITKKPNYRLYIIHKLKSLRVLDFKKVKSKERMEAENLFASKEVEEEAIRESAKTFI 180

Query: 611 XXXXXXXXXXXXXXXXXXXXXXTPEQIIAIKAAIVNSQTLEEVARLEKALQSGQVPADLN 790
                                 TPEQIIAIKAAIVNSQTLEEVARLEKAL SGQ+P DLN
Sbjct: 181 PGEVPNVTEDAEEQQNPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQIPTDLN 240

Query: 791 IGNT---------KNNDMATDGDKEAAVDGSS--KQEDDAPADMDQE 898
           I +          K++ MATDGD +   + S+  +Q+D   A M+QE
Sbjct: 241 IFDNDSELNTVQEKDDKMATDGDNKTDHEPSNLDEQKDSDSASMEQE 287


>ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|222841164|gb|EEE78711.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  294 bits (752), Expect = 4e-77
 Identities = 167/284 (58%), Positives = 183/284 (64%), Gaps = 8/284 (2%)
 Frame = +2

Query: 71  MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 250
           MVRLTADLIWKSPHFFNA++ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN 
Sbjct: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 251 PNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEIDPLASLPKLQYLSL 430
           P LNRLGTL+             GE+LPKLH+            EIDPL+SLPKLQ+LSL
Sbjct: 61  PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSL 120

Query: 431 LDNNITKKPNYRLYVIHKLKALRLLDFKKVKQKERIXXXXXXXXXXXXXXXXXXXXXTFX 610
           LDN ITKKPNYRLYVIHKLK+LR+LDFKKVK KER                      TF 
Sbjct: 121 LDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAKERAEAEHLFSSKEVEEEAKRESVKTFT 180

Query: 611 XXXXXXXXXXXXXXXXXXXXXXTPEQIIAIKAAIVNSQTLEEVARLEKALQSGQVPADLN 790
                                 TPEQIIAIKAAIVNSQTLEEVARLEKAL SGQ+PADL 
Sbjct: 181 PGEIPNIPEVAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240

Query: 791 I------GNTKNND--MATDGDKEAAVDGSSKQEDDAPADMDQE 898
           I       + K  D  MATD   EA  +   +Q+D+    M+QE
Sbjct: 241 ILDDTGSNSVKEQDDKMATDSQNEAEPNNLEEQKDNEATPMEQE 284


>ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|222846626|gb|EEE84173.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  293 bits (751), Expect = 5e-77
 Identities = 166/284 (58%), Positives = 183/284 (64%), Gaps = 8/284 (2%)
 Frame = +2

Query: 71  MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 250
           MVRLTADL+WKSPHFFNA++ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN 
Sbjct: 1   MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 251 PNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEIDPLASLPKLQYLSL 430
           P LNRLGTL+             GE+LPKLH+            EIDPLASLPKL +LSL
Sbjct: 61  PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSL 120

Query: 431 LDNNITKKPNYRLYVIHKLKALRLLDFKKVKQKERIXXXXXXXXXXXXXXXXXXXXXTFX 610
           LDNNITKKPNYRLYVIHKLK+LR+LDFKKVK KER                      TF 
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKGKERAEAEHLFASKEVEEEARRESVKTFT 180

Query: 611 XXXXXXXXXXXXXXXXXXXXXXTPEQIIAIKAAIVNSQTLEEVARLEKALQSGQVPADLN 790
                                 TP+QIIAIKAAIVNSQTLEEVARLEKAL SGQ+PADL 
Sbjct: 181 PGEVPNVLEGAEEQQAPKVVAPTPDQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240

Query: 791 I------GNTKNND--MATDGDKEAAVDGSSKQEDDAPADMDQE 898
           I       + K  D  MATD   EA  +   +Q+D+    M+QE
Sbjct: 241 ILDGTGSNSVKEQDDKMATDNQNEAEPNNLEEQKDNEATPMEQE 284


>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
           gi|296085571|emb|CBI29303.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  286 bits (732), Expect = 8e-75
 Identities = 162/287 (56%), Positives = 188/287 (65%), Gaps = 11/287 (3%)
 Frame = +2

Query: 71  MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 250
           MVRLTADLIWKSPHFFNA+RERELDLRGNK+AVIENLGATEDQFDTIDLSDNEIVKLEN 
Sbjct: 1   MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60

Query: 251 PNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEIDPLASLPKLQYLSL 430
           P LNRLGTLL             GE+LPKLH+            EIDPL+S PKLQ+LSL
Sbjct: 61  PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120

Query: 431 LDNNITKKPNYRLYVIHKLKALRLLDFKKVKQKERIXXXXXXXXXXXXXXXXXXXXXTFX 610
           LDNNITKKPNYRLYVIH+LK+LRLLDFKKVK KER+                     TF 
Sbjct: 121 LDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNKERLEAENLFASKEVEEEAKQEPLKTFT 180

Query: 611 XXXXXXXXXXXXXXXXXXXXXXTPEQIIAIKAAIVNSQTLEEVARLEKALQSGQVPADLN 790
                                 +PE++IAIKAAIVNSQTLEEVARLEKAL+SGQ+PADL 
Sbjct: 181 PGEMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 240

Query: 791 --IGNTKNNDMATDGDKEAAVDGSS---------KQEDDAPADMDQE 898
             + NT+ + +    DK  + + ++         +Q++D  A M+QE
Sbjct: 241 SLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVEEQKNDDVAPMEQE 287


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