BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020646
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001766402.1| predicted protein [Physcomitrella patens sub...   168   4e-40
ref|NP_567844.1| small nuclear ribonucleoprotein E [Arabidopsis ...   165   3e-39
ref|XP_001757108.1| predicted protein [Physcomitrella patens sub...   164   8e-39
ref|NP_179464.1| putative small nuclear ribonucleoprotein [Arabi...   163   1e-38
gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr...   162   2e-38

>ref|XP_001766402.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|168048491|ref|XP_001776700.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162671992|gb|EDQ58536.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162682311|gb|EDQ68730.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 87

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/87 (96%), Positives = 87/87 (100%)
 Frame = +2

Query: 80  MATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVS 259
           MATKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVS
Sbjct: 1   MATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVS 60

Query: 260 IKKKTRKPLGRILLKGDNITLMMNSGK 340
           +KKKTRKPLGRILLKGDNITLMMN+GK
Sbjct: 61  LKKKTRKPLGRILLKGDNITLMMNTGK 87


>ref|NP_567844.1| small nuclear ribonucleoprotein E [Arabidopsis thaliana]
           gi|297798942|ref|XP_002867355.1| hypothetical protein
           ARALYDRAFT_913445 [Arabidopsis lyrata subsp. lyrata]
           gi|21593343|gb|AAM65292.1| small nuclear
           ribonucleoprotein homolog [Arabidopsis thaliana]
           gi|51968366|dbj|BAD42875.1| small nuclear
           ribonucleoprotein homolog [Arabidopsis thaliana]
           gi|51968768|dbj|BAD43076.1| small nuclear
           ribonucleoprotein homolog [Arabidopsis thaliana]
           gi|51971773|dbj|BAD44551.1| small nuclear
           ribonucleoprotein homolog [Arabidopsis thaliana]
           gi|88010920|gb|ABD38873.1| At4g30330 [Arabidopsis
           thaliana] gi|297313191|gb|EFH43614.1| hypothetical
           protein ARALYDRAFT_913445 [Arabidopsis lyrata subsp.
           lyrata] gi|332660353|gb|AEE85753.1| small nuclear
           ribonucleoprotein E [Arabidopsis thaliana]
          Length = 88

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +2

Query: 83  ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSI 262
           +TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEEVSI
Sbjct: 3   STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 62

Query: 263 KKKTRKPLGRILLKGDNITLMMNSGK 340
           KKKTRKPLGRILLKGDNITLMMN+GK
Sbjct: 63  KKKTRKPLGRILLKGDNITLMMNAGK 88


>ref|XP_001757108.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162691606|gb|EDQ77967.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 87

 Score =  164 bits (415), Expect = 8e-39
 Identities = 81/87 (93%), Positives = 86/87 (98%)
 Frame = +2

Query: 80  MATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVS 259
           MATKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRIIGFDEYMNLVL+EAEEVS
Sbjct: 1   MATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEEAEEVS 60

Query: 260 IKKKTRKPLGRILLKGDNITLMMNSGK 340
           +KK TRKPLGRILLKGDNITLMMN+GK
Sbjct: 61  LKKNTRKPLGRILLKGDNITLMMNTGK 87


>ref|NP_179464.1| putative small nuclear ribonucleoprotein [Arabidopsis thaliana]
           gi|297836770|ref|XP_002886267.1| hypothetical protein
           ARALYDRAFT_900374 [Arabidopsis lyrata subsp. lyrata]
           gi|4185140|gb|AAD08943.1| putative small nuclear
           ribonucleoprotein E [Arabidopsis thaliana]
           gi|21592486|gb|AAM64436.1| putative small nuclear
           ribonucleoprotein E [Arabidopsis thaliana]
           gi|26452632|dbj|BAC43399.1| putative small nuclear
           ribonucleoprotein E [Arabidopsis thaliana]
           gi|28973515|gb|AAO64082.1| putative small nuclear
           ribonucleoprotein E [Arabidopsis thaliana]
           gi|297332107|gb|EFH62526.1| hypothetical protein
           ARALYDRAFT_900374 [Arabidopsis lyrata subsp. lyrata]
           gi|330251706|gb|AEC06800.1| putative small nuclear
           ribonucleoprotein [Arabidopsis thaliana]
          Length = 88

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = +2

Query: 83  ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSI 262
           +TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEEVSI
Sbjct: 3   STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 62

Query: 263 KKKTRKPLGRILLKGDNITLMMNSGK 340
           KK TRKPLGRILLKGDNITLMMN+GK
Sbjct: 63  KKNTRKPLGRILLKGDNITLMMNTGK 88


>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
          Length = 88

 Score =  162 bits (411), Expect = 2e-38
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = +2

Query: 83  ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSI 262
           +TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLD+AEEV++
Sbjct: 3   STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNV 62

Query: 263 KKKTRKPLGRILLKGDNITLMMNSGK 340
           KKKTRK LGRILLKGDNITLMMNSGK
Sbjct: 63  KKKTRKSLGRILLKGDNITLMMNSGK 88