BLASTX nr result

ID: Atractylodes21_contig00020596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020596
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [...    60   2e-07
ref|XP_002519838.1| synaptonemal complex protein, putative [Rici...    59   4e-07
ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [...    57   1e-06
emb|CBI33906.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 721

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 253 CNDEYGTKGKATCPICRVAIEQRIRVFGASS 161
           C+DEYG KGKATCP CRV I+QRIRVFGASS
Sbjct: 691 CSDEYGRKGKATCPCCRVQIQQRIRVFGASS 721


>ref|XP_002519838.1| synaptonemal complex protein, putative [Ricinus communis]
           gi|223540884|gb|EEF42442.1| synaptonemal complex
           protein, putative [Ricinus communis]
          Length = 781

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = -3

Query: 253 CNDEYGTKGKATCPICRVAIEQRIRVFGASS 161
           C+D YG KGKATCP CRV IEQRIRVFGASS
Sbjct: 751 CSDNYGKKGKATCPCCRVPIEQRIRVFGASS 781


>ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|222870230|gb|EEF07361.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = -3

Query: 253 CNDEYGTKGKATCPICRVAIEQRIRVFGASS 161
           C+D YG KGKATCP CRV IEQRIRVFGASS
Sbjct: 699 CSDNYGKKGKATCPCCRVPIEQRIRVFGASS 729


>ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 733

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -3

Query: 253 CNDEYGTKGKATCPICRVAIEQRIRVFGASS 161
           C+DEYG KGKA CP CRV I+QRIRVFGASS
Sbjct: 703 CSDEYGRKGKAICPCCRVQIQQRIRVFGASS 733


>emb|CBI33906.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 253 CNDEYGTKGKATCPICRVAIEQRIRVFGASS 161
           CN++YG KGKATCP CR  IEQRIR FGASS
Sbjct: 286 CNEDYGKKGKATCPSCRAPIEQRIRTFGASS 316


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