BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020525
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38034.1| unknown [Lotus japonicus]                              231   2e-58
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   228   1e-57
ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabi...   225   1e-56
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   225   1e-56
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   224   2e-56

>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score =  231 bits (589), Expect = 2e-58
 Identities = 120/195 (61%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
 Frame = +2

Query: 125 MSLPDEEITKLHRVRKTCFEMLRDRGYEVEDSEIDMTRKEFIDKYNGTIRREDLTFLKSK 304
           M+L +E+ITKLHR+RKT  +MLRDR Y V D EI+M+R EF  KY   ++REDLT  K+K
Sbjct: 1   MALTEEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTK 60

Query: 305 PDN-SDQIYVFFPDDLKIGVKIIKTYVIRMEQENIRRAIIVVRHGLTPSAKACQAEIAGR 481
            D  SDQIYVFFPD+ K+GVK +KTY  RM  EN+ RAI+V +  LTP AK C +E++ +
Sbjct: 61  KDGPSDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSK 120

Query: 482 FQVEVFQEAELLVNIRYHYLVPEHLPLTXXXXXXXXXXYTVKEAQLPRILPTDPVARYYG 661
           FQ+EVFQEAELLVNI+ H LVPEH  L           YTVKE QLPRI  TDPVARYYG
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYG 180

Query: 662 LRRGQVVKILRPIET 706
           L+RGQVVKI+RP ET
Sbjct: 181 LKRGQVVKIIRPSET 195


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  228 bits (582), Expect = 1e-57
 Identities = 119/196 (60%), Positives = 145/196 (73%), Gaps = 2/196 (1%)
 Frame = +2

Query: 125 MSLPDEEITKLHRVRKTCFEMLRDRGYEVEDSEIDMTRKEFIDKYNGTIRREDLTFLKSK 304
           M L +EEIT+L R+RKT F+MLRDRGY V D EIDMTR++F  KY   ++RED+   KSK
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 305 P-DNSDQIYVFFPDDLKIGVKIIKTYVIRMEQENIRRAIIVVRHGLTPSAKACQAEIAGR 481
             D+SDQIYVFFP++ K+G+K +KTY  RM+ EN+ RAI+VV+  LTP A+AC +E   +
Sbjct: 61  RNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSK 120

Query: 482 -FQVEVFQEAELLVNIRYHYLVPEHLPLTXXXXXXXXXXYTVKEAQLPRILPTDPVARYY 658
            F +EVFQEAELLVNI+ H LVPEH  L           YTVKE QLPRI  TDPVARYY
Sbjct: 121 SFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYY 180

Query: 659 GLRRGQVVKILRPIET 706
           GL+RGQVVKI+RP ET
Sbjct: 181 GLKRGQVVKIIRPSET 196


>ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana]
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           II subunit E [Arabidopsis thaliana]
          Length = 205

 Score =  225 bits (574), Expect = 1e-56
 Identities = 110/193 (56%), Positives = 146/193 (75%), Gaps = 1/193 (0%)
 Frame = +2

Query: 131 LPDEEITKLHRVRKTCFEMLRDRGYEVEDSEIDMTRKEFIDKYNGTIRREDLTFLKSKP- 307
           L +EE+ +L+R++KT  +MLRDRGY + DSE+ MT+++FI K+   ++REDL  LK+K  
Sbjct: 2   LTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRN 61

Query: 308 DNSDQIYVFFPDDLKIGVKIIKTYVIRMEQENIRRAIIVVRHGLTPSAKACQAEIAGRFQ 487
           DNSDQ+Y+FFPD+ K+GVK +K Y  RM+ EN+ RAI+VV+  LTP A+ C +EI+ +F 
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFH 121

Query: 488 VEVFQEAELLVNIRYHYLVPEHLPLTXXXXXXXXXXYTVKEAQLPRILPTDPVARYYGLR 667
           +EVFQEAE+LVNI+ H LVPEH  LT          YTVKE QLPRI  TDP+ARY+GL+
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 668 RGQVVKILRPIET 706
           RGQVVKI+RP ET
Sbjct: 182 RGQVVKIIRPSET 194


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  225 bits (573), Expect = 1e-56
 Identities = 117/195 (60%), Positives = 143/195 (73%), Gaps = 1/195 (0%)
 Frame = +2

Query: 125 MSLPDEEITKLHRVRKTCFEMLRDRGYEVEDSEIDMTRKEFIDKYNGTIRREDLTFLKSK 304
           M L +EE+ +L+R+RKT  +MLRDRG+ V D EI+M++ EF  KY   ++REDL   KSK
Sbjct: 1   MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 305 PDNS-DQIYVFFPDDLKIGVKIIKTYVIRMEQENIRRAIIVVRHGLTPSAKACQAEIAGR 481
            DNS DQIYVFFPD+ K+GVK +KTY  RM  EN+ RAI+V +  LTP A+ C +EI+ +
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120

Query: 482 FQVEVFQEAELLVNIRYHYLVPEHLPLTXXXXXXXXXXYTVKEAQLPRILPTDPVARYYG 661
           F +EVFQEAELLVNI+ H LVPEH  LT          YTVKE QLPRI  TDPVARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180

Query: 662 LRRGQVVKILRPIET 706
           L+RGQVVKI+RP ET
Sbjct: 181 LKRGQVVKIIRPSET 195


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  224 bits (571), Expect = 2e-56
 Identities = 110/193 (56%), Positives = 145/193 (75%), Gaps = 1/193 (0%)
 Frame = +2

Query: 131 LPDEEITKLHRVRKTCFEMLRDRGYEVEDSEIDMTRKEFIDKYNGTIRREDLTFLKSKP- 307
           L +EEI +L+R++KT  +ML+DRGY + DSE+ MT+++FI K+   ++REDL  LK K  
Sbjct: 2   LTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRN 61

Query: 308 DNSDQIYVFFPDDLKIGVKIIKTYVIRMEQENIRRAIIVVRHGLTPSAKACQAEIAGRFQ 487
           DNSDQ+Y+FFPD+ K+GVK +K Y  RM+ EN+ RAI+VV+  LTP A+ C +EI+ +F 
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 121

Query: 488 VEVFQEAELLVNIRYHYLVPEHLPLTXXXXXXXXXXYTVKEAQLPRILPTDPVARYYGLR 667
           +EVFQEAE+LVNI+ H LVPEH  LT          YTVKE QLPRI  TDP+ARY+GL+
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 668 RGQVVKILRPIET 706
           RGQVVKI+RP ET
Sbjct: 182 RGQVVKIIRPSET 194