BLASTX nr result

ID: Atractylodes21_contig00020470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020470
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           182   1e-43
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   165   2e-38
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   162   1e-37
ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycin...   161   2e-37
ref|XP_002321207.1| predicted protein [Populus trichocarpa] gi|2...   159   9e-37

>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  182 bits (461), Expect = 1e-43
 Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 9/145 (6%)
 Frame = +2

Query: 215 MGLSPYSNPSDAGVLCVILVNTAMSISIMKERVCSILHVVGIRVASSNQAFTES----VE 382
           MGLSPY+ P+DAGV CVILVNTA SISI+K  V SILHV+GI  AS  +   E      E
Sbjct: 1   MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSIEGPLDPFE 60

Query: 383 CRGSPSEAYMEEFRSQTPSLRYVSLS-----KQECSVCLTEFKPNAEINRLSCGHVFHKS 547
           CRGSPS +YMEEFRS+TP++RY SL       QEC VCL +F  +AEIN LSCGHVFHK 
Sbjct: 61  CRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHKL 120

Query: 548 CLEKWLKYWNITCPLCRNHMMIPKE 622
           CLEKWLK WN+TCPLCR+++M P+E
Sbjct: 121 CLEKWLKNWNVTCPLCRDYIM-PQE 144


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
           gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  165 bits (417), Expect = 2e-38
 Identities = 86/146 (58%), Positives = 106/146 (72%), Gaps = 14/146 (9%)
 Frame = +2

Query: 215 MGLSPYSNPSDAGVLCVILVNTAMSISIMKERVCSILHVVGIRVASSN---------QAF 367
           MGLS    PS+ GVLCV+LVNT +SISI K  V +ILH+VGI + SS+         QA 
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAA 59

Query: 368 TESVECRGSPSEAYMEEFRSQTPSLRYVSLS-----KQECSVCLTEFKPNAEINRLSCGH 532
            ES E   SPSE+Y+EEFRS+TP+LR+ S+      + +CSVCLT+F+P +EINRLSCGH
Sbjct: 60  PESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGH 119

Query: 533 VFHKSCLEKWLKYWNITCPLCRNHMM 610
           +FHK CLEKWL YWNITCPLCR  +M
Sbjct: 120 LFHKVCLEKWLDYWNITCPLCRTPLM 145


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223526146|gb|EEF28485.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 156

 Score =  162 bits (410), Expect = 1e-37
 Identities = 86/156 (55%), Positives = 111/156 (71%), Gaps = 14/156 (8%)
 Frame = +2

Query: 215 MGLSPYSNPSDAGVLCVILVNTAMSISIMKERVCSILHVVGIRVASS---------NQAF 367
           MGLS    PS+ GVLCV+LVNTA+SISI K  V SILH+VGIR++SS         N+  
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYNEDP 59

Query: 368 TESVECRGSPSEAYMEEFRSQTPSLRYVSLSK-----QECSVCLTEFKPNAEINRLSCGH 532
           T+  E R  PSE+Y+ EFRS+TP+ R+ S+ +      +CSVCLT F+P +EIN LSCGH
Sbjct: 60  TDLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSCGH 119

Query: 533 VFHKSCLEKWLKYWNITCPLCRNHMMIPKEVEENTC 640
           +FHK CLEKWL YWN+TCPLCR+  +IP E + ++C
Sbjct: 120 LFHKVCLEKWLDYWNVTCPLCRS-PVIPSEEDTSSC 154


>ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycine max]
           gi|255639664|gb|ACU20126.1| unknown [Glycine max]
          Length = 155

 Score =  161 bits (408), Expect = 2e-37
 Identities = 84/147 (57%), Positives = 105/147 (71%), Gaps = 15/147 (10%)
 Frame = +2

Query: 215 MGLSPYSNPSDAGVLCVILVNTAMSISIMKERVCSILHVVGIRVASSNQAFT-------- 370
           MGLS    PS+ GVLCV+LVNT +SISI K  V +ILH+VGI ++SS+            
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLT 59

Query: 371 --ESVECRGSPSEAYMEEFRSQTPSLRYVSLS-----KQECSVCLTEFKPNAEINRLSCG 529
             ES E   SPSE+Y+EEFRS+TP+LR+ S+      + +CSVCLT+F+P +EINRLSCG
Sbjct: 60  APESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCG 119

Query: 530 HVFHKSCLEKWLKYWNITCPLCRNHMM 610
           H+FHK CLEKWL YWNITCPLCR  +M
Sbjct: 120 HLFHKVCLEKWLDYWNITCPLCRTPLM 146


>ref|XP_002321207.1| predicted protein [Populus trichocarpa] gi|222861980|gb|EEE99522.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  159 bits (402), Expect = 9e-37
 Identities = 86/149 (57%), Positives = 109/149 (73%), Gaps = 13/149 (8%)
 Frame = +2

Query: 215 MGLSPYSNPSDAGVLCVILVNTAMSISIMKERVCSILHVVGIRVA-------SSNQAFT- 370
           MGLS    PS+ GVLCV+LVNTA+SISI+K  V SILH+VGIR++       S N   T 
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTALSISIVKGIVRSILHIVGIRLSPSASLPSSDNAEDTR 59

Query: 371 ESVECRGSPSEAYMEEFRSQTPSLRYVSLS-----KQECSVCLTEFKPNAEINRLSCGHV 535
           ES+E R SP E Y+EEFRS+ PS+R+ ++      + +CSVCLT+F+P +EIN LSCGH+
Sbjct: 60  ESLEFRLSPPENYIEEFRSRMPSIRFNTVCSCEQPEHDCSVCLTQFEPESEINSLSCGHI 119

Query: 536 FHKSCLEKWLKYWNITCPLCRNHMMIPKE 622
           FHK CLEKWL YWNITCPLCR   ++P+E
Sbjct: 120 FHKMCLEKWLDYWNITCPLCRT-PLLPEE 147


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