BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020406
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]          75   5e-12
gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]            64   1e-08
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                   63   3e-08
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]          63   3e-08
emb|CAN82633.1| hypothetical protein VITISV_028135 [Vitis vinifera]    63   3e-08

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = -2

Query: 216 CLCARYQADPKESQMAAVKRIFRYLKGSPKLGLWYPKN 103
           CLCARYQA+PKES +AAVKRIFRYLKG+P LGLWYPK+
Sbjct: 203 CLCARYQANPKESHLAAVKRIFRYLKGTPNLGLWYPKD 240


>gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]
          Length = 1063

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -2

Query: 216 CLCARYQADPKESQMAAVKRIFRYLKGSPKLGLWYPK 106
           C+CAR+Q+DPKES + AVKRI RYL  SPK GLWYP+
Sbjct: 863 CMCARFQSDPKESHLTAVKRILRYLAYSPKFGLWYPR 899


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -2

Query: 216 CLCARYQADPKESQMAAVKRIFRYLKGSPKLGLWYPK 106
           C+CAR+Q+DPKES + AVKRI RYL  +PK GLWYP+
Sbjct: 863 CMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPR 899


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -2

Query: 216  CLCARYQADPKESQMAAVKRIFRYLKGSPKLGLWYPK 106
            C+CAR+Q+DPKES + AVKRI RYL  +PK GLWYP+
Sbjct: 1560 CMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPR 1596


>emb|CAN82633.1| hypothetical protein VITISV_028135 [Vitis vinifera]
          Length = 978

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -2

Query: 216 CLCARYQADPKESQMAAVKRIFRYLKGSPKLGLWYPK 106
           CLCAR+Q+ PKES ++AVKRI RYLKG+  +GLWYPK
Sbjct: 265 CLCARFQSCPKESHLSAVKRILRYLKGTMNIGLWYPK 301