BLASTX nr result

ID: Atractylodes21_contig00020304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020304
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT44125.1| 20S proteasome beta subunit E [Saussurea medusa]       112   2e-23
ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [V...    86   3e-15
ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis t...    85   7e-15
ref|XP_002876966.1| hypothetical protein ARALYDRAFT_484397 [Arab...    83   2e-14
ref|XP_002312631.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>gb|AAT44125.1| 20S proteasome beta subunit E [Saussurea medusa]
          Length = 150

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/58 (93%), Positives = 57/58 (98%)
 Frame = -1

Query: 176 MKLDFSGLESSAPLYGGSNDLLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT 3
           MKLDF GLESSAPLYGG++D+LSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT
Sbjct: 1   MKLDFGGLESSAPLYGGNDDVLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT 58


>ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
           gi|297738390|emb|CBI27591.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -1

Query: 176 MKLDFSGLESSAPLYGGSNDLLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT 3
           MKLD SGLES+ PL+G +++LL  GFS APSF+LP T+DFDGFQK +IQMVKPAKGTT
Sbjct: 1   MKLDTSGLESTVPLFGANSELLG-GFSAAPSFELPNTTDFDGFQKDAIQMVKPAKGTT 57


>ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
           gi|75273433|sp|Q9LIP2.1|PSB5B_ARATH RecName:
           Full=Proteasome subunit beta type-5-B; AltName: Full=20S
           proteasome beta subunit E-2; AltName: Full=Proteasome
           epsilon-2 chain; Flags: Precursor
           gi|16612308|gb|AAL27514.1|AF439846_1 AT3g26340/F20C19_6
           [Arabidopsis thaliana] gi|9294292|dbj|BAB02194.1|
           proteasome epsilon chain precursor [Arabidopsis
           thaliana] gi|21553804|gb|AAM62897.1| 26S proteasome beta
           subunit, putative [Arabidopsis thaliana]
           gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6
           [Arabidopsis thaliana] gi|332643626|gb|AEE77147.1|
           proteasome subunit beta type-5-B [Arabidopsis thaliana]
          Length = 273

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
 Frame = -1

Query: 176 MKLDFSGLESSAPLYG-GSNDLLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT 3
           MKLD SGLE++ P+ G GSN  + DGFS+APSFDLP T+DFDGFQK +++MVKPAKGTT
Sbjct: 1   MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTT 59


>ref|XP_002876966.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
           lyrata] gi|297322804|gb|EFH53225.1| hypothetical protein
           ARALYDRAFT_484397 [Arabidopsis lyrata subsp. lyrata]
          Length = 274

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/59 (67%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
 Frame = -1

Query: 176 MKLDFSGLESSAPLYG-GSNDLLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT 3
           MKLD SGLE++ P+ G GSN  + DGFS+ PSFDLP T+DFDGFQK +++MVKPAKGTT
Sbjct: 1   MKLDTSGLETTMPVIGFGSNSEMLDGFSSVPSFDLPRTTDFDGFQKKAVEMVKPAKGTT 59


>ref|XP_002312631.1| predicted protein [Populus trichocarpa] gi|222852451|gb|EEE89998.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = -1

Query: 176 MKLDFSGLESSAPLYGGSNDLLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTT 3
           MK D SGLES+A ++G +   L DGFS AP+F+LP T+DFDGFQK ++QMVKPAKGTT
Sbjct: 1   MKFDTSGLESTASVFGTAGSELVDGFSAAPAFELPTTTDFDGFQKEAVQMVKPAKGTT 58


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