BLASTX nr result

ID: Atractylodes21_contig00020252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020252
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula...    50   9e-08
ref|XP_003628458.1| Alpha-1 6-xylosyltransferase [Medicago trunc...    50   4e-06
gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    47   4e-06
ref|XP_003592092.1| hypothetical protein MTR_1g098630 [Medicago ...    50   8e-06

>ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula]
           gi|355505842|gb|AES86984.1| GDP-mannose transporter
           [Medicago truncatula]
          Length = 650

 Score = 49.7 bits (117), Expect(2) = 9e-08
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
 Frame = +3

Query: 207 EIESLDHCFAGCSFVLQIWEGIRRWWGLPR-PFGSSLAEVMESTSVLVPSRSKPIFQAVV 383
           +IES  H F  C+    +W  +R W G+   PFG      ++ T +    R   ++  ++
Sbjct: 93  DIESATHLFLHCNVFGSLWSLVRNWLGISSVPFGELRTHFIQFTKMSGMPRVSHLYFRII 152

Query: 384 W-SSLYLMWKSRNELVFENT 440
           W ++++++WK RN  +F+N+
Sbjct: 153 WFATIWVIWKKRNNRIFKNS 172



 Score = 31.2 bits (69), Expect(2) = 9e-08
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   FSVKAL-RSILDDKVLGPSSLPIETWRSKMVPMKIWIFVWKLRLGRLPVRSFLHNLGF 171
           +SVK   R       +   SL  + W  K +P K+ + VW+L   RLP +  L + GF
Sbjct: 23  YSVKIFYRYFTSTSHISDRSLVDDVWH-KHIPSKVSVLVWRLLRNRLPTKDNLVHRGF 79


>ref|XP_003628458.1| Alpha-1 6-xylosyltransferase [Medicago truncatula]
           gi|355522480|gb|AET02934.1| Alpha-1 6-xylosyltransferase
           [Medicago truncatula]
          Length = 763

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = +3

Query: 207 EIESLDHCFAGCSFVLQIWEGIRRWWGLPR-PFGSSLAEVMESTSVLVPSRSKPIFQAVV 383
           ++E+  H F  C+    IW  +  W G+   P G      M+ T ++   RS  ++  ++
Sbjct: 678 QLETSSHLFVTCNIFSSIWFHVWSWLGIDFVPSGDLRQHFMQFTKMVGLPRSTHLYFRII 737

Query: 384 W-SSLYLMWKSRNELVFENT 440
           W +S++++WK RN+ VF+NT
Sbjct: 738 WFASVWVLWKERNDRVFQNT 757



 Score = 25.0 bits (53), Expect(2) = 4e-06
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 25  ILDDKVLGPSSLPIETWRSKMVPMKIWIFVWKLRLGRLPVRSFL 156
           ++D   L   +L  + W  K +P K  + VW+L   RLP +  L
Sbjct: 617 MIDVGELVDRTLVDDIWH-KQIPSKASLMVWRLLRDRLPTKDNL 659


>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 47.4 bits (111), Expect(2) = 4e-06
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +3

Query: 207 EIESLDHCFAGCSFVLQIWEGIRRWWGLPRPFGSSLAEVMESTSVL--VPSRSKPIFQAV 380
           ++ES  H F  C     +W  ++ W G+     S + E     +++  +P  S  +F+ +
Sbjct: 408 KLESATHLFLDCRIPTMVWLHVQNWIGISTVSPSQMREHFTQFTLMAGMPRSSHSVFKVI 467

Query: 381 VWSSLYLMWKSRNELVFENT 440
            ++ ++++WK RN  VF NT
Sbjct: 468 WFAYVWVIWKDRNNRVFNNT 487



 Score = 28.1 bits (61), Expect(2) = 4e-06
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 67  ETWRSKMVPMKIWIFVWKLRLGRLPVRSFL 156
           + W  + +P K+ +FVW+L   RLP +  L
Sbjct: 361 DVWH-RYIPQKVSLFVWRLLRNRLPTKDNL 389


>ref|XP_003592092.1| hypothetical protein MTR_1g098630 [Medicago truncatula]
           gi|355481140|gb|AES62343.1| hypothetical protein
           MTR_1g098630 [Medicago truncatula]
          Length = 219

 Score = 49.7 bits (117), Expect(2) = 8e-06
 Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
 Frame = +3

Query: 207 EIESLDHCFAGCSFVLQIWEGIRRWWGLPRPFGSSLAE-VMESTSVLVPSRSKPIFQAVV 383
           + E+ DH F  CSF + +W+ +RRW G      +++A+ +++ T +    ++K  F  ++
Sbjct: 96  QTETSDHLFTSCSFCVSLWQHVRRWIGFVGADANNVADHLVQFTYITGVGKAKRSFLQLI 155

Query: 384 W-SSLYLMWKSRNELVFEN 437
           W    +++W  RN  +F N
Sbjct: 156 WLLCTWVLWNERNNHLFNN 174



 Score = 24.6 bits (52), Expect(2) = 8e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 88  VPMKIWIFVWKLRLGRLPVRSFLHNLG-FDLHSTLC 192
           VP+K+ IF W+L    L  ++ L   G     +TLC
Sbjct: 55  VPLKVSIFAWRLVRNHLHTKANLTARGVLQTEATLC 90


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