BLASTX nr result

ID: Atractylodes21_contig00020171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020171
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316965.1| histone H2 [Populus trichocarpa] gi|22286003...   180   3e-43
gb|ABK94182.1| unknown [Populus trichocarpa]                          180   3e-43
ref|XP_002319269.1| histone 2 [Populus trichocarpa] gi|222857645...   178   1e-42
gb|ABK94384.1| unknown [Populus trichocarpa]                          176   3e-42
ref|XP_002282795.1| PREDICTED: histone H2A.6 isoform 1 [Vitis vi...   174   2e-41

>ref|XP_002316965.1| histone H2 [Populus trichocarpa] gi|222860030|gb|EEE97577.1|
           histone H2 [Populus trichocarpa]
          Length = 133

 Score =  180 bits (456), Expect = 3e-43
 Identities = 96/133 (72%), Positives = 97/133 (72%)
 Frame = +1

Query: 76  MAGRGKTLXXXXXXXXXXXXXXXGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 255
           MAGRGKTL               GLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 256 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 435
                   GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 436 KTAGSSKPSVDDE 474
           KT GSSK S DD+
Sbjct: 121 KTGGSSKASADDD 133


>gb|ABK94182.1| unknown [Populus trichocarpa]
          Length = 134

 Score =  180 bits (456), Expect = 3e-43
 Identities = 96/133 (72%), Positives = 97/133 (72%)
 Frame = +1

Query: 76  MAGRGKTLXXXXXXXXXXXXXXXGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 255
           MAGRGKTL               GLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 256 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 435
                   GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 436 KTAGSSKPSVDDE 474
           KT GSSK S DD+
Sbjct: 121 KTGGSSKASADDD 133


>ref|XP_002319269.1| histone 2 [Populus trichocarpa] gi|222857645|gb|EEE95192.1| histone
           2 [Populus trichocarpa]
          Length = 169

 Score =  178 bits (451), Expect = 1e-42
 Identities = 98/149 (65%), Positives = 103/149 (69%)
 Frame = +1

Query: 28  LFALLIKFFPANLQTAMAGRGKTLXXXXXXXXXXXXXXXGLQFPVGRIARFLKAGKYAER 207
           LF +  +F     Q+ MAGRGKTL               GLQFPVGRIARFLKAGKYAER
Sbjct: 21  LFTVSFEFLSDKNQS-MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAER 79

Query: 208 VGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTI 387
           VGAGAP                  GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTI
Sbjct: 80  VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTI 139

Query: 388 ANGGVMPNIHNLLLPKKTAGSSKPSVDDE 474
           ANGGVMPNIHNLLLPKK+ GSSK   DD+
Sbjct: 140 ANGGVMPNIHNLLLPKKSGGSSKAPADDD 168


>gb|ABK94384.1| unknown [Populus trichocarpa]
          Length = 134

 Score =  176 bits (447), Expect = 3e-42
 Identities = 94/133 (70%), Positives = 96/133 (72%)
 Frame = +1

Query: 76  MAGRGKTLXXXXXXXXXXXXXXXGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 255
           MAGRGKTL               GLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 256 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 435
                   GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 436 KTAGSSKPSVDDE 474
           K+ GSSK   DD+
Sbjct: 121 KSGGSSKAPADDD 133


>ref|XP_002282795.1| PREDICTED: histone H2A.6 isoform 1 [Vitis vinifera]
           gi|302143197|emb|CBI20492.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  174 bits (441), Expect = 2e-41
 Identities = 94/133 (70%), Positives = 95/133 (71%)
 Frame = +1

Query: 76  MAGRGKTLXXXXXXXXXXXXXXXGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 255
           MAGRGKTL               GLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 256 XXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 435
                   GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120

Query: 436 KTAGSSKPSVDDE 474
           K  GSSK S  D+
Sbjct: 121 KAGGSSKASGGDD 133


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