BLASTX nr result

ID: Atractylodes21_contig00020142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020142
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    85   5e-15
ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...    84   9e-15
ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    84   1e-14
ref|XP_003614879.1| hypothetical protein MTR_5g060750 [Medicago ...    81   8e-14
ref|XP_003614868.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    80   1e-13

>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/105 (43%), Positives = 62/105 (59%)
 Frame = -2

Query: 468 ILSFLDMKYAIQTCKLSRKWKHIWTSMPHLNLNCQTFPTLPQFAKFVKHALSHRNDQTEV 289
           ILSF + K A QTC LS++WK++W  +  L L+ + F T+  F KFV H LSHR+D T +
Sbjct: 25  ILSFFNTKEAAQTCILSKRWKNLWKFVTTLKLSTRHFETIHPFTKFVSHVLSHRDDSTAL 84

Query: 288 SATELTFAGKTTQFVIKSIVNYAYSHKVRQLTMIWVTVKDVEFPP 154
            A +   A     +++K IV YA SH V+QL  I V      FPP
Sbjct: 85  QALDSHRASIVEAYLLKKIVKYAVSHSVQQL-QISVDADFQCFPP 128


>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 52/147 (35%), Positives = 73/147 (49%)
 Frame = -2

Query: 468 ILSFLDMKYAIQTCKLSRKWKHIWTSMPHLNLNCQTFPTLPQFAKFVKHALSHRNDQTEV 289
           ILS L+ K+A+QTC LS +WK++W  +P L L    F  + +FAKFV   LS RND T +
Sbjct: 30  ILSSLNTKHAVQTCILSTRWKNLWKRLPSLALRSSDFRNVKRFAKFVSRVLSLRNDSTSL 89

Query: 288 SATELTFAGKTTQFVIKSIVNYAYSHKVRQLTMIWVTVKDVEFPPYXXXXXXXXXXXLAT 109
              +         +++K IV YA SH V+QL  + V      FPP            L  
Sbjct: 90  HTVDFCRTAIVEPYLLKKIVKYAVSHNVQQLD-VSVAGNMEYFPPSFFSCRTLTSLSLDL 148

Query: 108 RQPTLRHYGVRLPDSAWDFPALETLNL 28
                  YG +L  ++ + PAL  L+L
Sbjct: 149 SDGRRMSYGGKLFPNSLNLPALLNLSL 175


>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
 Frame = -2

Query: 468 ILSFLDMKYAIQTCKLSRKWKHIWTSMPHLNLNCQTFPTLPQFAKFVKHALSHRNDQTEV 289
           ILSFL+ K A++TC LS +WK++W  +P L L+   F T   F KFV   LSHR+    +
Sbjct: 42  ILSFLNAKEAVRTCILSNRWKNVWKCVPTLVLHSSDFSTFKNFTKFVSKILSHRDGTIAL 101

Query: 288 SATELTFAGKTTQFVIKSIVNYAYSHKVRQLTMIWVTVK-DVEFPPYXXXXXXXXXXXLA 112
              +    G     ++K IVNYA+SH V++L    ++VK D+                  
Sbjct: 102 QELDFERVGSIEPHLLKRIVNYAFSHNVQRL---GISVKGDICHILPCVSSCRTLTSLKL 158

Query: 111 TRQPTLRH-YGVRLPDSAWDFPALETLNLSN 22
           +  P  RH YG  L   + D PAL +L+L N
Sbjct: 159 SVSPKGRHNYGRTLFPKSLDLPALTSLHLGN 189


>ref|XP_003614879.1| hypothetical protein MTR_5g060750 [Medicago truncatula]
           gi|355516214|gb|AES97837.1| hypothetical protein
           MTR_5g060750 [Medicago truncatula]
          Length = 370

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = -2

Query: 468 ILSFLDMKYAIQTCKLSRKWKHIWTSMPHLNLNCQTFP-TLPQFAKFVKHALSHRNDQTE 292
           ILSFLD K+A+QTC LS +W ++W  +  L L+   FP  L  F KFV H LS RND T 
Sbjct: 31  ILSFLDTKHAVQTCILSPRWNNLWKHLSSLKLSSIHFPKNLKGFTKFVSHVLSLRNDTTS 90

Query: 291 VSATELTFAGKTTQFVIKSIVNYAYSHKVRQL 196
           + A +   +G     ++K I+ YA+SH V+QL
Sbjct: 91  LLALDFHRSGTMDPRLLKRILKYAFSHNVQQL 122


>ref|XP_003614868.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355516203|gb|AES97826.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 258

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
 Frame = -2

Query: 468 ILSFLDMKYAIQTCKLSRKWKHIWTSMPHLNLNCQTFP-TLPQFAKFVKHALSHRNDQTE 292
           ILSFLD K+A+QTC LS +W ++W  +  + L+ + FP  L  F KFV H  S R+D T 
Sbjct: 30  ILSFLDTKHAVQTCILSPRWNNLWKHLSSIKLSSRHFPKNLKGFTKFVSHVFSLRDDTTS 89

Query: 291 VSATELTFAGKTTQFVIKSIVNYAYSHKVRQLTMIWVTVKDVEFPPYXXXXXXXXXXXLA 112
           + A +    G     ++K I+ YA++H V+QL  + V   + +FPP            L 
Sbjct: 90  LLALDFQREGTMDPRILKIILKYAFAHNVQQLE-VDVKCFNPQFPP-----SFFSCHTLT 143

Query: 111 TRQPTLRHYG-VRLPDSAWDFPALETLNLSNLQLG 10
           T + T+ HY    L  ++ + P +  L+L+    G
Sbjct: 144 TLKLTIDHYSHQNLFPTSPNLPQITNLSLNGFLFG 178


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