BLASTX nr result

ID: Atractylodes21_contig00020115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020115
         (2735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   479   e-132
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   455   e-125
ref|XP_002528998.1| DNA binding protein, putative [Ricinus commu...   446   e-122
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   417   e-113
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   405   e-110

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  479 bits (1233), Expect = e-132
 Identities = 256/480 (53%), Positives = 316/480 (65%), Gaps = 15/480 (3%)
 Frame = +2

Query: 158  PLDSSPNPVTPPNLTSAPPIPITDSKHPTTPA---TVNSRPREPDSDVIHVPSYSRWFSW 328
            P+ +S   +T    +S+  IP   S+ P   +   +V   PR  + + I++PSYSRWFSW
Sbjct: 10   PIGASTETLTQQPDSSSSIIPTVKSEIPVAASASPSVGIVPRASEPETINIPSYSRWFSW 69

Query: 329  NNIHECEVRILPEFFDGRSPSKTPKVYKYYRNAIINRFRDSIKENPPSKENPMPKITFTE 508
            NN+HECEVR LPEFFD RSPSK P+VYKYYRN+II  FR          +NP  K+TFT+
Sbjct: 70   NNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFR----------QNPSRKLTFTD 119

Query: 509  ARKSIIGDVGSVRKVFDILEAWGLINYFGSPMTKAQLKWEDKESKNVSAASHQNSDPGGA 688
             RK ++GDVGS+R+VFD LEAWGLINY GS + K  LKWE+K++K+  A+SH     GGA
Sbjct: 120  VRKILVGDVGSIRRVFDFLEAWGLINYSGSAL-KQPLKWEEKDNKSGGASSHTGDAGGGA 178

Query: 689  NSVGDASVPKKKFCSSCNSLCTIACFSNIKKDTTFCARCYVRA----GVNSADFKRVEIS 856
                  S+PK+++CS C SLC+IACF+  K D T CARCYVR     GVNS+DF+RVEIS
Sbjct: 179  VE----SIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRRVEIS 234

Query: 857  EEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRSEKECVDRFIKLPFGEQFLGPPDS 1036
            E+ K  WT+KETLHLLEAV HY DDWKKV+EHV GR+EKECV  FIKL FGEQ+LG   S
Sbjct: 235  EDTKAGWTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSFGEQYLGHTSS 294

Query: 1037 AEPEENFHKATNQLDT--------ESPPSKKMRPTPFDDASNPILAQAAFLSKLXXXXXX 1192
             + +  F +A +Q D          S  SKKMR TP  DASNPI+AQAAFLS L      
Sbjct: 295  GDVDNKFSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAFLSALVGVEVA 354

Query: 1193 XXXXXXXXXXXXXXNNETSKEILESSAGDARHHGDSVTTNGKSNTNSWEGAYLEANLQLQ 1372
                          +    KE L S A  AR    +V +NG + +N  EGAY++A   L+
Sbjct: 355  EAAARAAVASLSDVDPRKMKEGLGSFANGARIQDPNVESNGNTTSNVLEGAYVDAKSLLE 414

Query: 1373 KEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMEREWQQLRQMQNLLFADQLTLLFHK 1552
            +EE D+ER IS I EVQ K+I DKIV FEE EL ME+EWQQL+QM+NLLF DQLTLLF K
Sbjct: 415  REELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLLFVDQLTLLFQK 474


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222842348|gb|EEE79895.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 500

 Score =  455 bits (1170), Expect = e-125
 Identities = 252/480 (52%), Positives = 310/480 (64%), Gaps = 18/480 (3%)
 Frame = +2

Query: 158  PLDSSPNPVTPPNLTSAPPIPITDSKHPTTPATVNSRPREPDSDVIHVPSYSRWFSWNNI 337
            PL S+  P   P  T+AP      S  P  P   +S P     DV+H+PSYSRWFSW+NI
Sbjct: 16   PLSSTVKPEIQPPTTAAP------SPRPPQPPPPSSEP-----DVVHIPSYSRWFSWDNI 64

Query: 338  HECEVRILPEFFDGRSPSKTPKVYKYYRNAIINRFRDSIKENPPSKENPMPKITFTEARK 517
            HECEVR LPEFFD RSPSK P VYKYYRN+II++FR          +NP  K+TFTE RK
Sbjct: 65   HECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFR----------KNPSAKLTFTEIRK 114

Query: 518  SIIGDVGSVRKVFDILEAWGLINYFGSPMTKAQLKWED-KESKNVSAASHQNSDPGGANS 694
            +++GDVGS+R+VFD L+AWGLINY  SP+ K QLKWED K+S + +AAS      G   +
Sbjct: 115  TLVGDVGSIRRVFDFLDAWGLINY--SPLNK-QLKWEDGKDSSSKTAASPAGGGGGDGGT 171

Query: 695  VGDASVPK-----KKFCSSCNSLCTIACFSNIKKDTTFCARCYVRA----GVNSADFKRV 847
             GDA+        K+ CS C SLC+IACF   K D T CARCYVR     GV+S+DF+RV
Sbjct: 172  AGDANASNTKDNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRV 231

Query: 848  EISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRSEKECVDRFIKLPFGEQFLGP 1027
            EISEE +TDWTEKETL LLEAV HYRDDWKKV++HV GRSEK+C+  FIKLPFGE F   
Sbjct: 232  EISEEARTDWTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDY 291

Query: 1028 PDSAEPEENFHKATNQLDTES--------PPSKKMRPTPFDDASNPILAQAAFLSKLXXX 1183
             D  + +  +++  +  D ES          SKK+R +P  DASNPI+AQAAFLS L   
Sbjct: 292  TDVGDVDSKYNQIKDCDDDESGRNGNGSPSTSKKIRLSPLVDASNPIMAQAAFLSALAGT 351

Query: 1184 XXXXXXXXXXXXXXXXXNNETSKEILESSAGDARHHGDSVTTNGKSNTNSWEGAYLEANL 1363
                                 SK  LE  +   +H    V +NG +N ++   A L+AN 
Sbjct: 352  EVAEAAARAAVTTLTEVEYGGSKGSLEFVSRVTKHLDSGVASNGDTNLSASVKACLDANS 411

Query: 1364 QLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMEREWQQLRQMQNLLFADQLTLL 1543
             L+KEE D+ER IS I EVQ K+I DKI+RFEEL+LQME+EWQQL QM+NLLFADQL++L
Sbjct: 412  LLEKEESDVERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVL 471


>ref|XP_002528998.1| DNA binding protein, putative [Ricinus communis]
            gi|223531538|gb|EEF33368.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 482

 Score =  446 bits (1148), Expect = e-122
 Identities = 247/505 (48%), Positives = 311/505 (61%), Gaps = 15/505 (2%)
 Frame = +2

Query: 134  TTENQKPQPLDSSPNPVTP---PNLTSAPPIPITDSKHPTTPATVNSRPREP----DSDV 292
            +T + K  PL SS  PV P   P   ++       S+  T P+T N  PR P    D+DV
Sbjct: 4    STPSFKDPPLPSS-TPVPPSLKPTTATSTSTSTATSEFLTPPSTNNVTPRPPPPSSDADV 62

Query: 293  IHVPSYSRWFSWNNIHECEVRILPEFFDGRSPSKTPKVYKYYRNAIINRFRDSIKENPPS 472
            +H+PSYSRWFSWN+IHECEVR LP+FFD RSPSK P+VYKYYRN+II  FR +       
Sbjct: 63   VHIPSYSRWFSWNSIHECEVRFLPDFFDSRSPSKNPRVYKYYRNSIIKCFRQN------- 115

Query: 473  KENPMPKITFTEARKSIIGDVGSVRKVFDILEAWGLINYFGSPMTKAQLKWEDKESKNVS 652
              NP  KITFTE RK+++GDVGS+R+VFD LEAWGLINYF S ++K  LKWEDK++K+ +
Sbjct: 116  --NPSVKITFTEVRKTLVGDVGSIRRVFDFLEAWGLINYFPSALSKP-LKWEDKDAKSSA 172

Query: 653  AASHQNSDPGGANSVGDASVPKKKFCSSCNSLCTIACFSNIKKDTTFCARCYVRAGVNSA 832
            +A  + +         DA+   K+ CS C S+C+IACF   K D T CARCYVR      
Sbjct: 173  SADVKGNSADSTPPKRDAT---KRLCSGCQSVCSIACFVCDKFDLTLCARCYVRG----- 224

Query: 833  DFKRVEISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRSEKECVDRFIKLPFGE 1012
                + + EE++++WTEKETL LLEAV H+ DDWKKV+ HV GRSE++CV  FIKLPFGE
Sbjct: 225  ---TIALVEEIRSEWTEKETLQLLEAVTHFGDDWKKVALHVPGRSERDCVSHFIKLPFGE 281

Query: 1013 QFLGPPDSAEPEENFHKATNQLDT--------ESPPSKKMRPTPFDDASNPILAQAAFLS 1168
            QF G  D  E  + + +  +  D          S  SKKMR TP  DASNPI+ QAAFLS
Sbjct: 282  QFAGYTDLGELNDKYDQVKDSSDAVCGSESIDSSSSSKKMRLTPLADASNPIMGQAAFLS 341

Query: 1169 KLXXXXXXXXXXXXXXXXXXXXNNETSKEILESSAGDARHHGDSVTTNGKSNTNSWEGAY 1348
             L                     +E SK  L S +   R  G    +NG +  N  E   
Sbjct: 342  ALAGTEVAEAAARAAVTAL----SEPSKSSLGSFSRSTREQGAIDASNGNAEQNGCERTS 397

Query: 1349 LEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMEREWQQLRQMQNLLFAD 1528
            L+AN  L+KEE D ER IS + EVQ K+I DKI+RFE+L+L ME+EWQQL Q++NLLF D
Sbjct: 398  LDANSLLEKEELDAERAISRLVEVQLKEIQDKIIRFEKLDLLMEKEWQQLEQVKNLLFVD 457

Query: 1529 QLTLLFHKNDGTSRNGSMEQKVKTE 1603
            QLTLLFHK         +E+ V+TE
Sbjct: 458  QLTLLFHKKSAPKTEEHVEENVRTE 482


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  417 bits (1071), Expect = e-113
 Identities = 238/508 (46%), Positives = 308/508 (60%), Gaps = 18/508 (3%)
 Frame = +2

Query: 131  ITTENQKPQPLDSSPNPVTPPNLTSAPPIPITDSKHPTTPATVNSRPREPDSDVIHVPSY 310
            + T   +P P  +   P  PP     PP P+  +      A ++      +++VI VPSY
Sbjct: 1    MATTATEPLPSSAEMPPAPPP--PKQPPQPVAAASAVKPEAPLSDSKASAEANVIVVPSY 58

Query: 311  SRWFSWNNIHECEVRILPEFFDGRSPSKTPKVYKYYRNAIINRFRDSIKENPPSKENPMP 490
            SRWFSW++I ECEVR LPEFF+  S SK+P+VYKYYRN+I+  FR           NP  
Sbjct: 59   SRWFSWDSIDECEVRHLPEFFE--SASKSPRVYKYYRNSIVKYFR----------YNPTR 106

Query: 491  KITFTEARKSIIGDVGSVRKVFDILEAWGLINYFGSPMTKAQLKWEDKESKNVSAASHQN 670
            KITFT+ RK+++GDVGS+R+VFD LE WGLINY  S      LKW+DKE+K+ SA++   
Sbjct: 107  KITFTDVRKTLVGDVGSIRRVFDFLETWGLINYHPSSSLTKPLKWDDKETKSDSASNTTE 166

Query: 671  SDPGGANSVGDASVPKKKFCSSCNSLCTIACFSNIKKDTTFCARCYVRA----GVNSADF 838
            S      S   A    K+ CS C  +CTIACF+  K D T CARCYVR     GVNS+DF
Sbjct: 167  S------SSAPAKENTKRLCSGCKVVCTIACFACDKYDLTLCARCYVRGNYRVGVNSSDF 220

Query: 839  KRVEISEEVKTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRSEKECVDRFIKLPFGEQF 1018
            +RVEISEE KTDW EKET +LLEA+ HY DDWK+VS+HV GR+EKECV  F+KLPF +QF
Sbjct: 221  RRVEISEETKTDWNEKETTNLLEAITHYSDDWKRVSQHVPGRTEKECVAHFLKLPFVDQF 280

Query: 1019 L---------GPPDSAEPEENFHK--ATNQLDT--ESPPSKKMRPTPFDDASNPILAQAA 1159
                      G  DS  P +      A ++LDT   + P+K+MR TP  DASNPI+AQAA
Sbjct: 281  QHYQQHPAVNGTDDSCNPLKRVTNADAESELDTVASAEPNKRMRLTPLADASNPIMAQAA 340

Query: 1160 FLSKLXXXXXXXXXXXXXXXXXXXXNNETSKEILESSAGDARHHGDSVTTNGKSNTNSWE 1339
            FLS L                       T K    S   +       + +NG + ++S++
Sbjct: 341  FLSALAGSEVAQAAAQAALTTLSEVYKAT-KINYRSFPRNTLLQDAGIMSNGGNTSDSFQ 399

Query: 1340 GAYLEANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMEREWQQLRQMQNLL 1519
            G+ L AN+QL+KEE D+E+ IS+I EVQ K+I DK+V+FE+L+L ME+E QQL QM+N+ 
Sbjct: 400  GSRLHANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMF 459

Query: 1520 FADQLTLLFHKNDGTSRNGSME-QKVKT 1600
            F DQLTLLFHK+         E   VKT
Sbjct: 460  FLDQLTLLFHKSSAPKTGECQEGNNVKT 487


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  405 bits (1040), Expect = e-110
 Identities = 242/547 (44%), Positives = 316/547 (57%), Gaps = 32/547 (5%)
 Frame = +2

Query: 8    LSLSSSPPCTRGLRLMATSSGGG-----GTPLKPQAQTPKPTSEPTITTENQKPQPLDSS 172
            LSL SSP  T GL   +             PL   A +P        + +   P P   S
Sbjct: 30   LSLLSSPDLTDGLFCYSDLYSPELPLSISFPLVMAANSPVQDPPTDASAKQSAPSP---S 86

Query: 173  PNPVTPPNLTSAPPIPI--TDSKHPTTPATVNSRPREPDSDVIHVPSYSRWFSWNNIHEC 346
            P  VTPP     PP     T S  P         P+    D IH+PSYSRWFSWN IHEC
Sbjct: 87   PALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQSTSPDPIHLPSYSRWFSWNGIHEC 146

Query: 347  EVRILPEFFDGRSPSKTPKVYKYYRNAIINRFRDSIKENPPSKENPMPKITFTEARKSII 526
            EVR LPEFFD RSPSK P+VYKY RN+I+  FR          E P  KITFT+ RK+++
Sbjct: 147  EVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR----------ECPSKKITFTDIRKTLV 196

Query: 527  GDVGSVRKVFDILEAWGLINYFGSPMTKAQLKWEDKESKNVSAASHQNSDPGGANSVGDA 706
             DVGS+R+VFD LEAWGLINY  S ++K  LKW+D++SK+ ++AS+   +PGG ++  ++
Sbjct: 197  ADVGSIRRVFDFLEAWGLINYSPSALSKP-LKWDDRDSKSNASASN-TGEPGGGSA--NS 252

Query: 707  SVPK---KKFCSSCNSLCTIACFSNIKKDTTFCARCYVRA----GVNSADFKRVEISEEV 865
            S PK   K+ CS C S+C+IACF+  K D T CARCYVR     GV+S+DF+RVEI+++ 
Sbjct: 253  SAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDDT 312

Query: 866  KTDWTEKETLHLLEAVFHYRDDWKKVSEHVVGRSEKECVDRFIKLPFGEQFLGPPDSAEP 1045
            +TDWT+KETLHLLEA+ HY DDWKKV++HV GR+E+ECV +F+KLP GEQF G PDS   
Sbjct: 313  RTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQFHGYPDSEHI 372

Query: 1046 EEN-----------FHKATNQLDTESPPSKKMRPTPFDDASNPILAQAAFLSKLXXXXXX 1192
            + N             ++T ++ T S P+K++R +P  DASNPI+AQAAFLS L      
Sbjct: 373  DNNCTVKDEASANLMLESTGKIGT-SIPNKRIRLSPLADASNPIMAQAAFLSSLVGVEVA 431

Query: 1193 XXXXXXXXXXXXXXNNETSKEI-------LESSAGDARHHGDSVTTNGKSNTNSWEGAYL 1351
                          +     EI       +     DA  HG S  + G +          
Sbjct: 432  EAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASHGGSCLSRGST---------- 481

Query: 1352 EANLQLQKEEQDLERTISDIAEVQAKDIHDKIVRFEELELQMEREWQQLRQMQNLLFADQ 1531
                       D+E+ IS I +VQ K+I DK+  FEE ELQME+ ++QL QM+++LF DQ
Sbjct: 482  ----------MDMEKAISHIVDVQMKEIVDKLNGFEEGELQMEKVFKQLDQMKSMLFVDQ 531

Query: 1532 LTLLFHK 1552
            L LLF+K
Sbjct: 532  LNLLFNK 538


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