BLASTX nr result

ID: Atractylodes21_contig00020087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020087
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   461   e-127
ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...   457   e-126
ref|XP_002876454.1| seven in absentia family protein [Arabidopsi...   457   e-126
ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis...   456   e-126
emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]   454   e-125

>ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Vitis vinifera]
            gi|297746416|emb|CBI16472.3| unnamed protein product
            [Vitis vinifera]
          Length = 308

 Score =  461 bits (1187), Expect = e-127
 Identities = 211/308 (68%), Positives = 251/308 (81%), Gaps = 2/308 (0%)
 Frame = -3

Query: 1065 MAPGGNVYQDVTESHATPADRGVKSANVEGRSS--LRLWGPAGGRPATASNSTVHDLLEC 892
            MAPGG + ++V ES +  AD  V +AN+E RSS   +     GG+    S S VH+LLEC
Sbjct: 1    MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGMPSTSGVHELLEC 60

Query: 891  PVCLNVMCPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCKY 712
            PVC+++M PPIHQCPNGHT+C  CK++V N CP CR ELGNIRCLALEK+AES+ELPC+Y
Sbjct: 61   PVCMDLMHPPIHQCPNGHTLCSNCKARVHNCCPTCRFELGNIRCLALEKIAESLELPCRY 120

Query: 711  HFYGCQDMLPYHSRMMHEEICKYRGYNCPYAGAECPVTGDIPFIVAHLKADHSVDMHDGS 532
              +GC D+ PY+S++ HE+ C++R Y+CPYAGAEC VTGDIP +V HLK DH VDMHDG 
Sbjct: 121  QIFGCHDIFPYYSKLKHEQNCQFRPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGC 180

Query: 531  SFNHRYVKPNPLEIENATWMLTIFNCFGYQFCLHFEAFHLGMAPVYMAFLRFMGEEDDAN 352
            +FNHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAFHLGMAPVYMAFLRFMG+E++A 
Sbjct: 181  TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFHLGMAPVYMAFLRFMGDENEAR 240

Query: 351  KFSYSLEVGGNGRKLKWQGIPRSIRDGHVSVRDSLDGLIIPRNIGLFFSGGDRQELKLKV 172
            KFSYSLEVGG GRKL WQG+PRSIRD H  VRDS DGL+I R + LFFSGG+RQ+LKLKV
Sbjct: 241  KFSYSLEVGGYGRKLIWQGVPRSIRDSHKMVRDSQDGLVIQRKLALFFSGGERQQLKLKV 300

Query: 171  SGRIWKEQ 148
            +GRIWKEQ
Sbjct: 301  AGRIWKEQ 308


>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
            gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
            putative [Ricinus communis]
          Length = 304

 Score =  457 bits (1176), Expect = e-126
 Identities = 207/306 (67%), Positives = 249/306 (81%)
 Frame = -3

Query: 1065 MAPGGNVYQDVTESHATPADRGVKSANVEGRSSLRLWGPAGGRPATASNSTVHDLLECPV 886
            MAPGG+  ++V ESH   +D  + +A  E  S++      GG+    SN+ VH+LLECPV
Sbjct: 1    MAPGGSACKEVLESHPAISDYEIGTAKTENNSTVTKG--LGGKQGLYSNNGVHELLECPV 58

Query: 885  CLNVMCPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCKYHF 706
            C N+M PPIHQCPNGHT+C  CKS+V N CP CR +LGNIRCLALEKVAES+ELPCKY  
Sbjct: 59   CTNLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQD 118

Query: 705  YGCQDMLPYHSRMMHEEICKYRGYNCPYAGAECPVTGDIPFIVAHLKADHSVDMHDGSSF 526
             GC D+ PY+S++ HE+ C++R Y+CPYAG+EC +TGDIP +VAHLK DH VDMHDG +F
Sbjct: 119  LGCHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCTF 178

Query: 525  NHRYVKPNPLEIENATWMLTIFNCFGYQFCLHFEAFHLGMAPVYMAFLRFMGEEDDANKF 346
            NHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAF +GMAPVYMAFLRFMG++++A KF
Sbjct: 179  NHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQIGMAPVYMAFLRFMGDDNEAKKF 238

Query: 345  SYSLEVGGNGRKLKWQGIPRSIRDGHVSVRDSLDGLIIPRNIGLFFSGGDRQELKLKVSG 166
            SYSLEVGGNGRKL WQGIPRSIRD H  VRDS DGLII R++ L+FSGGDRQELKL+++G
Sbjct: 239  SYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRITG 298

Query: 165  RIWKEQ 148
            RIWKE+
Sbjct: 299  RIWKEE 304


>ref|XP_002876454.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297322292|gb|EFH52713.1| seven in absentia family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  457 bits (1175), Expect = e-126
 Identities = 210/309 (67%), Positives = 251/309 (81%), Gaps = 3/309 (0%)
 Frame = -3

Query: 1065 MAPGGNVYQDVTESHATPADRGVKSANVEGRSSLRLWGPAG---GRPATASNSTVHDLLE 895
            MAPGG+  ++V ES++T  D  VK+A VE  ++ +   P     G+    SN+ V++LLE
Sbjct: 1    MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNNKPTKPGSAGIGKYGIHSNNGVYELLE 60

Query: 894  CPVCLNVMCPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCK 715
            CPVC N+M PPIHQCPNGHT+C  CK +VQN+CP CR ELGNIRCLALEKVAES+E+PC+
Sbjct: 61   CPVCTNLMYPPIHQCPNGHTLCSNCKVRVQNTCPTCRYELGNIRCLALEKVAESLEVPCR 120

Query: 714  YHFYGCQDMLPYHSRMMHEEICKYRGYNCPYAGAECPVTGDIPFIVAHLKADHSVDMHDG 535
            Y   GC D+ PY+S++ HE+ C++R Y CPYAG+EC VTGDIP +V HLK DH VDMHDG
Sbjct: 121  YQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECAVTGDIPTLVVHLKDDHKVDMHDG 180

Query: 534  SSFNHRYVKPNPLEIENATWMLTIFNCFGYQFCLHFEAFHLGMAPVYMAFLRFMGEEDDA 355
             +FNHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAF LGMAPVYMAFLRFMG+E++A
Sbjct: 181  CTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEA 240

Query: 354  NKFSYSLEVGGNGRKLKWQGIPRSIRDGHVSVRDSLDGLIIPRNIGLFFSGGDRQELKLK 175
             KFSYSLEVG +GRKL WQGIPRSIRD H  VRDS DGLIIPRN+ L+FSGGDRQELKL+
Sbjct: 241  KKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLR 300

Query: 174  VSGRIWKEQ 148
            V+GRIWKE+
Sbjct: 301  VTGRIWKEE 309


>ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
            gi|46577554|sp|Q9M2P4.1|SINA2_ARATH RecName: Full=E3
            ubiquitin-protein ligase SINAT2; AltName: Full=Seven in
            absentia homolog 2 gi|6729547|emb|CAB67632.1| putative
            protein [Arabidopsis thaliana] gi|21593355|gb|AAM65304.1|
            putative RING zinc finger protein [Arabidopsis thaliana]
            gi|105830184|gb|ABF74716.1| At3g58040 [Arabidopsis
            thaliana] gi|332646214|gb|AEE79735.1| E3
            ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
          Length = 308

 Score =  456 bits (1173), Expect = e-126
 Identities = 212/308 (68%), Positives = 252/308 (81%), Gaps = 2/308 (0%)
 Frame = -3

Query: 1065 MAPGGNVYQDVTESHATPADRGVKSANVEGRSSLRLW-GPAG-GRPATASNSTVHDLLEC 892
            MAPGG+  ++V ES++T  D  VK+A VE  ++     G AG G+    SN+ V++LLEC
Sbjct: 1    MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 891  PVCLNVMCPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCKY 712
            PVC N+M PPIHQCPNGHT+C  CK +VQN+CP CR ELGNIRCLALEKVAES+E+PC+Y
Sbjct: 61   PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 711  HFYGCQDMLPYHSRMMHEEICKYRGYNCPYAGAECPVTGDIPFIVAHLKADHSVDMHDGS 532
               GC D+ PY+S++ HE+ C++R Y CPYAG+EC VTGDIP +V HLK DH VDMHDG 
Sbjct: 121  QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 531  SFNHRYVKPNPLEIENATWMLTIFNCFGYQFCLHFEAFHLGMAPVYMAFLRFMGEEDDAN 352
            +FNHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAF LGMAPVYMAFLRFMG+E++A 
Sbjct: 181  TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK 240

Query: 351  KFSYSLEVGGNGRKLKWQGIPRSIRDGHVSVRDSLDGLIIPRNIGLFFSGGDRQELKLKV 172
            KFSYSLEVG +GRKL WQGIPRSIRD H  VRDS DGLIIPRN+ L+FSGGDRQELKL+V
Sbjct: 241  KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV 300

Query: 171  SGRIWKEQ 148
            +GRIWKE+
Sbjct: 301  TGRIWKEE 308


>emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]
          Length = 308

 Score =  454 bits (1169), Expect = e-125
 Identities = 209/308 (67%), Positives = 247/308 (80%), Gaps = 2/308 (0%)
 Frame = -3

Query: 1065 MAPGGNVYQDVTESHATPADRGVKSANVEGRSS--LRLWGPAGGRPATASNSTVHDLLEC 892
            MAPGG + ++V ES +  AD  V +AN+E RSS   +     GG+    S S VH+LLEC
Sbjct: 1    MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGXPSTSGVHELLEC 60

Query: 891  PVCLNVMCPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCKY 712
            PVC+++M PPIHQCPNGHT+C  CK++V N CP CR ELGNIRCLAL K+AES+E PC+Y
Sbjct: 61   PVCMDLMHPPIHQCPNGHTLCSNCKARVHNCCPTCRFELGNIRCLALVKIAESLEFPCRY 120

Query: 711  HFYGCQDMLPYHSRMMHEEICKYRGYNCPYAGAECPVTGDIPFIVAHLKADHSVDMHDGS 532
              +GC D+ PY+S++ HE  C++R Y+CPYAGAEC VTGDIP +V HLK DH VDMHDG 
Sbjct: 121  QIFGCHDIFPYYSKLKHEXNCQFRPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGC 180

Query: 531  SFNHRYVKPNPLEIENATWMLTIFNCFGYQFCLHFEAFHLGMAPVYMAFLRFMGEEDDAN 352
            +FNHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAFHLGMAPVYMAFLRFMG+E++A 
Sbjct: 181  TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFHLGMAPVYMAFLRFMGDENEAR 240

Query: 351  KFSYSLEVGGNGRKLKWQGIPRSIRDGHVSVRDSLDGLIIPRNIGLFFSGGDRQELKLKV 172
            KFSYSLEVGG GRKL WQG+PRSIRD H  VRDS DGL I R + LFFSGG+RQ+LKLKV
Sbjct: 241  KFSYSLEVGGYGRKLIWQGVPRSIRDSHKMVRDSQDGLXIQRKLALFFSGGERQQLKLKV 300

Query: 171  SGRIWKEQ 148
            +GRIWKEQ
Sbjct: 301  AGRIWKEQ 308


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