BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020053
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35069.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   173   1e-41
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   171   6e-41
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   170   1e-40
ref|XP_004155998.1| PREDICTED: DNA-directed RNA polymerase III s...   170   1e-40

>emb|CBI35069.3| unnamed protein product [Vitis vinifera]
          Length = 1309

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/113 (72%), Positives = 95/113 (84%)
 Frame = -2

Query: 378 LDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANDLVTSRFD 199
           + K F A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYFV+T+IKKIVRAND + S  D
Sbjct: 24  IHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVD 83

Query: 198 PTVYLRYKDVWIGKPSVVVDGVTDSLSPQKCRLSDMTYAAPIFVNIEYCNGSH 40
           P++YLR+KDV IG+PS+ VDG+++ L+P  CRLSDMTYAAPI VNIEY  GSH
Sbjct: 84  PSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSH 136


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera]
          Length = 1142

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/113 (72%), Positives = 95/113 (84%)
 Frame = -2

Query: 378 LDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANDLVTSRFD 199
           + K F A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYFV+T+IKKIVRAND + S  D
Sbjct: 6   IHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVD 65

Query: 198 PTVYLRYKDVWIGKPSVVVDGVTDSLSPQKCRLSDMTYAAPIFVNIEYCNGSH 40
           P++YLR+KDV IG+PS+ VDG+++ L+P  CRLSDMTYAAPI VNIEY  GSH
Sbjct: 66  PSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSH 118


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Glycine max]
          Length = 1152

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/117 (69%), Positives = 99/117 (84%)
 Frame = -2

Query: 390 GNGGLDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANDLVT 211
           G+ G D++ L AP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRT+IKKIVRANDL+ 
Sbjct: 27  GDSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIV 86

Query: 210 SRFDPTVYLRYKDVWIGKPSVVVDGVTDSLSPQKCRLSDMTYAAPIFVNIEYCNGSH 40
           +   P +YLR+ +V IGKPS+++D VT+ L+PQ CRLSD+TYAAPI  ++EY  GSH
Sbjct: 87  ASRYPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSH 143


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/113 (73%), Positives = 93/113 (82%)
 Frame = -2

Query: 378 LDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANDLVTSRFD 199
           +DKQ L AP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV   IKKIVRAND + S  D
Sbjct: 22  IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVD 81

Query: 198 PTVYLRYKDVWIGKPSVVVDGVTDSLSPQKCRLSDMTYAAPIFVNIEYCNGSH 40
           P +YLR+KDV IG PS ++DGV++ LSP  CRLSD TYAAPI VN+EY  GSH
Sbjct: 82  PGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSH 134


>ref|XP_004155998.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like,
           partial [Cucumis sativus]
          Length = 392

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/137 (61%), Positives = 108/137 (78%), Gaps = 4/137 (2%)
 Frame = -2

Query: 438 IMRLIDDAA----MLDASLQGNGGLDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDS 271
           +++L +DA+    + D S   +  +DKQF+  P+KSAVDKFQLLPEFLKVRGLVKQHLDS
Sbjct: 2   VVKLPEDASKNEKLCDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDS 61

Query: 270 FNYFVRTEIKKIVRANDLVTSRFDPTVYLRYKDVWIGKPSVVVDGVTDSLSPQKCRLSDM 91
           FNYFV TEIKKIV+AND + S  DP++YLR+ DV IG+PSV V+ V+++++P  CRLSD+
Sbjct: 62  FNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDL 121

Query: 90  TYAAPIFVNIEYCNGSH 40
           TYAAPI V+IEY   SH
Sbjct: 122 TYAAPILVDIEYIEESH 138