BLASTX nr result

ID: Atractylodes21_contig00020052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020052
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    66   7e-09
ref|XP_003593942.1| Glutamate-gated kainate-type ion channel rec...    61   2e-07
ref|XP_003593941.1| hypothetical protein MTR_2g019580 [Medicago ...    61   2e-07
gb|ABD32801.1| H+-transporting two-sector ATPase, alpha/beta sub...    61   3e-07
ref|XP_003616434.1| hypothetical protein MTR_5g080250 [Medicago ...    61   3e-07

>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
 Frame = -1

Query: 684 PISLNICAWRTLRHRLPTKMNLVRRG--MTNITTTCSWCGSPEEKEDHLFVTCDFSKKIL 511
           P  +++  WR LR+RLPTK NL+RR   + N+      CG  E    HLF+ C     + 
Sbjct: 368 PQKVSLFVWRLLRNRLPTKDNLMRRRIILANVVDCVYECGKLESAT-HLFLDCRIPTMVW 426

Query: 510 SEFCAWWAIDPDDASNISDLFN--TCCSKISASQCELFIAAFYTYIWELWYLRNSLVHSD 337
                W  I     S + + F   T  + +  S   +F   ++ Y+W +W  RN+ V ++
Sbjct: 427 LHVQNWIGISTVSPSQMREHFTQFTLMAGMPRSSHSVFKVIWFAYVWVIWKDRNNRVFNN 486

Query: 336 THLNHSIL 313
           T  NHS+L
Sbjct: 487 TGSNHSVL 494


>ref|XP_003593942.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Medicago truncatula] gi|355482990|gb|AES64193.1|
           Glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Medicago truncatula]
          Length = 598

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
 Frame = -1

Query: 681 ISLNICAWRTLRHRLPTKMNLVRRGMTNITTT-CS-WCGSPEEKEDHLFVTCDFSKKILS 508
           + ++I AWR LR RLPTK+NL+ RG+ + T T CS  CG  E  + HLF+ CD    I  
Sbjct: 415 LKVSILAWRLLRDRLPTKINLLNRGILSATNTYCSAGCGQLESAQ-HLFLHCDVFGIIWQ 473

Query: 507 EFCAWWAIDPDDASNISDLFNTCCSKISASQC--ELFIAAFYTYIWELWYLRNSLVHSDT 334
           +  +W  +   D  ++   F    + +S ++         +  ++W +W  RN+   + +
Sbjct: 474 QVRSWIGVVGVDHQSLRAHFFHFTNYLSCARARKSFLHLIWLLHVWFVWNERNNRHFNSS 533

Query: 333 H-LNHSILSHIQAQSFF 286
           H LN  ++  I+  S++
Sbjct: 534 HTLNTELIDKIKFHSYW 550


>ref|XP_003593941.1| hypothetical protein MTR_2g019580 [Medicago truncatula]
           gi|355482989|gb|AES64192.1| hypothetical protein
           MTR_2g019580 [Medicago truncatula]
          Length = 375

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
 Frame = -1

Query: 681 ISLNICAWRTLRHRLPTKMNLVRRGMTNITTT-CS-WCGSPEEKEDHLFVTCDFSKKILS 508
           + ++I AWR LR RLPTK+NL+ RG+ + T T CS  CG  E  + HLF+ CD    I  
Sbjct: 192 LKVSILAWRLLRDRLPTKINLLNRGILSATNTYCSAGCGQLESAQ-HLFLHCDVFGIIWQ 250

Query: 507 EFCAWWAIDPDDASNISDLFNTCCSKISASQC--ELFIAAFYTYIWELWYLRNSLVHSDT 334
           +  +W  +   D  ++   F    + +S ++         +  ++W +W  RN+   + +
Sbjct: 251 QVRSWIGVVGVDHQSLRAHFFHFTNYLSCARARKSFLHLIWLLHVWFVWNERNNRHFNSS 310

Query: 333 H-LNHSILSHIQAQSFF 286
           H LN  ++  I+  S++
Sbjct: 311 HTLNTELIDKIKFHSYW 327


>gb|ABD32801.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region, related [Medicago truncatula]
          Length = 210

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
 Frame = -1

Query: 690 EHPISLNICAWRTLRHRLPTKMNLVRRG--MTNITTTCSWCGSPEEKEDHLFVTCDFSKK 517
           E P+ +++ AWR LR RLPT  NL++R   + N       CG  E+ + HLF++CDF  K
Sbjct: 73  EVPLKISLFAWRLLRDRLPTTDNLIKRHILLPNARLCLGGCGMMEDAK-HLFLSCDFFGK 131

Query: 516 I---LSEFCAWWAIDPDDASNISDLFNTCCSKISASQCELFIAAFYTYIWELWYLRNSLV 346
           +   +S + ++  + P+  S+    F T     S +    F   + + +W +W   N+ V
Sbjct: 132 LWYDISHWLSYHIVFPEHVSDHLYQFGT-LGGFSKNNRSAFHLIWLSCVWVIWLEMNARV 190

Query: 345 HSDTHLN-HSILSHIQAQSF 289
              T  + + +L  ++ QS+
Sbjct: 191 FHQTEASINQLLDKVKLQSY 210


>ref|XP_003616434.1| hypothetical protein MTR_5g080250 [Medicago truncatula]
           gi|355517769|gb|AES99392.1| hypothetical protein
           MTR_5g080250 [Medicago truncatula]
          Length = 188

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
 Frame = -1

Query: 684 PISLNICAWRTLRHRLPTKMNLVRRGMTNITT--TCSWCGSPEEKEDHLFVTCDFSKKIL 511
           P++++I AWR LR RLPTK NL+RRG+         + CG  +E   HLF  C+    + 
Sbjct: 65  PLNVSILAWRLLRDRLPTKNNLIRRGIIQADNIRCVAGCGF-DESRAHLFPQCELFGSLW 123

Query: 510 SEFCAWWAIDPDDASNISDLFNTCCSKISASQC--ELFIAAFYTYIWELWYLRNSLVHSD 337
               +W  I   D  NI D F      I  S+         +   IW +W  RN+++ S+
Sbjct: 124 QHVRSWIDISGADPQNIHDHFIQLTHYIGHSRTHKSFLQLVWLLCIWLVWTERNNMLFSN 183


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