BLASTX nr result

ID: Atractylodes21_contig00020019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020019
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_763598.1| cold shock protein [Theileria parva strain Mugu...    64   1e-08
ref|XP_955311.1| cold shock protein [Theileria annulata strain A...    62   4e-08
dbj|BAM40996.1| cold shock protein [Theileria orientalis strain ...    62   4e-08
ref|XP_003880829.1| lin-28 homolog B, related [Neospora caninum ...    60   2e-07
emb|CBI17369.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_763598.1| cold shock protein [Theileria parva strain Muguga]
           gi|68350551|gb|EAN31315.1| cold shock protein, putative
           [Theileria parva]
          Length = 94

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/49 (57%), Positives = 41/49 (83%)
 Frame = +3

Query: 3   EGGEDLFVHQSEIQAEGYRSLQDGQKVKFLVVVKNNRKQAVNVAGLDGS 149
           E GED+FVHQSEI A+G+RSL++ +KV+  V++ NNRK+A++V G +GS
Sbjct: 23  ENGEDVFVHQSEIYADGFRSLRENEKVELEVIMDNNRKKAIHVTGPNGS 71


>ref|XP_955311.1| cold shock protein [Theileria annulata strain Ankara]
           gi|65303457|emb|CAI75835.1| cold shock protein, putative
           [Theileria annulata]
          Length = 95

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   EGGEDLFVHQSEIQAEGYRSLQDGQKVKFLVVVKNNRKQAVNVAGLDGS 149
           E GED+FVHQSEI A+G+RSL + +KV+  V++ NNRK+A++V G +G+
Sbjct: 23  ENGEDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRKKAIHVTGPNGT 71


>dbj|BAM40996.1| cold shock protein [Theileria orientalis strain Shintoku]
          Length = 110

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/48 (56%), Positives = 41/48 (85%)
 Frame = +3

Query: 3   EGGEDLFVHQSEIQAEGYRSLQDGQKVKFLVVVKNNRKQAVNVAGLDG 146
           + GED+FVHQSEI A+G+RSL++ +KV+  VV++N+RK+A++V G DG
Sbjct: 23  DSGEDVFVHQSEIYADGFRSLRENEKVELEVVLENDRKKAIHVTGPDG 70


>ref|XP_003880829.1| lin-28 homolog B, related [Neospora caninum Liverpool]
           gi|325115241|emb|CBZ50796.1| lin-28 homolog B, related
           [Neospora caninum Liverpool]
          Length = 133

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
 Frame = +3

Query: 3   EGGEDLFVHQSEIQAEGYRSLQDGQKVKFLVVVKNN-RKQAVNVAGLDGS 149
           E G DLFVHQSEI+AEG+R+L +G++V+F++   N+ RK+AVNV G +GS
Sbjct: 23  EDGTDLFVHQSEIRAEGFRNLAEGEQVEFVIQTGNDGRKKAVNVTGPNGS 72


>emb|CBI17369.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
 Frame = +3

Query: 3   EGGEDLFVHQSEIQAEGYRSLQDGQKVKFLVVV-KNNRKQAVNVAGLDGS 149
           EGGEDLFVHQS I+++G+RSL +G+ V+F +V+ ++ R +AV+V G DGS
Sbjct: 26  EGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKAVDVTGPDGS 75


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