BLASTX nr result

ID: Atractylodes21_contig00020006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020006
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...    72   6e-11
emb|CBI27448.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glyc...    59   4e-07
ref|XP_002885267.1| uracil DNA glycosylase family protein [Arabi...    59   5e-07
emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]    56   3e-06

>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
 Frame = -1

Query: 265 MASSKAITDFFPPAKRSKRVAPAAASSFLSVPPKPSTDALPSALPESIHDDH----SSPS 98
           MA+SK + D+  P+KR K   P ++SS  S  PK     + S       D H    SSPS
Sbjct: 1   MAASKTLMDYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPS 60

Query: 97  SNLSAEQKLRVQFNQSLAKAKRNLKICAERVS 2
           S L+A QK R++FN+ LAK+KRNL IC+++VS
Sbjct: 61  SALTAHQKSRIEFNKFLAKSKRNLTICSQKVS 92


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 DFFPPAKRSKRVAPAAASSFLSVPPKPSTDALPSALPESIHDDH----SSPSSNLSAEQK 74
           D+  P+KR K   P ++SS  S  PK     + S       D H    SSPSS L+A QK
Sbjct: 2   DYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPSSALTAHQK 61

Query: 73  LRVQFNQSLAKAKRNLKICAERVS 2
            R++FN+ LAK+KRNL IC+++VS
Sbjct: 62  SRIEFNKFLAKSKRNLTICSQKVS 85


>ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glycine max]
          Length = 303

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/87 (42%), Positives = 50/87 (57%)
 Frame = -1

Query: 262 ASSKAITDFFPPAKRSKRVAPAAASSFLSVPPKPSTDALPSALPESIHDDHSSPSSNLSA 83
           A S+ +TDFF PA  SKR+ P                     LP S   D ++ +S LS 
Sbjct: 4   APSRTLTDFFQPA--SKRLKPT--------------------LPASCKSDDAN-ASTLSV 40

Query: 82  EQKLRVQFNQSLAKAKRNLKICAERVS 2
           +QKLR+++N+ LAK+KRNLK+C ERVS
Sbjct: 41  DQKLRMEYNKLLAKSKRNLKLCVERVS 67


>ref|XP_002885267.1| uracil DNA glycosylase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331107|gb|EFH61526.1| uracil DNA
           glycosylase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
 Frame = -1

Query: 262 ASSKAITDFFPPAKRSKRVAPAAASSFLSVPPKPSTDALPSA--------LPESIHDDHS 107
           +SSK + DFF PAKR K  A  ++SSF +V     +  L SA        +  S+ DD  
Sbjct: 3   SSSKTLMDFFQPAKRLK--ASPSSSSFPAVSVAGGSRGLVSAANSPPRVTVTTSVADD-- 58

Query: 106 SPSSNLSAEQKLRVQFNQSLAKAKRNLKICAERVS 2
             SS L+ EQ  R +FN+ +AK+KRNL +C+E+V+
Sbjct: 59  --SSGLTPEQVARAEFNKFVAKSKRNLAVCSEKVT 91


>emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]
          Length = 281

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
 Frame = -1

Query: 241 DFFPPAKRSKRVAPAAASSFLSVPPKPSTDALP-SALPESIHDDH-----SSPSSNLSAE 80
           D+  P+KR K   P  +SS  S    P +  LP S+L  S   D      SSPSS L+A 
Sbjct: 2   DYLQPSKRLKVSTPTTSSSSSS----PXSLLLPVSSLSHSQSQDPHQSPPSSPSSTLTAH 57

Query: 79  QKLRVQFNQSLAKAKRNLKICAERVS 2
           QK R++FN+ LA +KRNL IC+++VS
Sbjct: 58  QKSRIEFNKFLAISKRNLTICSQKVS 83


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