BLASTX nr result

ID: Atractylodes21_contig00019990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019990
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   105   3e-21
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   104   6e-21
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   104   8e-21
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   104   8e-21
gb|AAB82754.1| retrofit [Oryza longistaminata]                        103   1e-20

>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/72 (63%), Positives = 56/72 (77%)
 Frame = -2

Query: 217 LEQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTN 38
           LE LF+  PD S LRVFGC C+PHLRPYN HK+ FRS  C FLGYS+ H G++CLDP+T 
Sbjct: 666 LEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTG 725

Query: 37  RLYIARHVRFNE 2
           R+YI+R V F+E
Sbjct: 726 RVYISRDVIFDE 737


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score =  104 bits (260), Expect = 6e-21
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = -2

Query: 217 LEQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTN 38
           LE+L  HKPD + LRVFGC C+P+LRPYN HK+ FRS  C FLGYS+ H G++CLDP+T 
Sbjct: 664 LERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTG 723

Query: 37  RLYIARHVRFNE 2
           R+YI+R V F+E
Sbjct: 724 RVYISRDVVFDE 735


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 969

 Score =  104 bits (259), Expect = 8e-21
 Identities = 43/71 (60%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 EQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTNR 35
           E+LFH +PD S LR+FGC C+P+LRPYN HK+ FRS  C+FLGYSS H G++CLD +T R
Sbjct: 514 ERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGR 573

Query: 34  LYIARHVRFNE 2
           +Y++R V F+E
Sbjct: 574 VYVSRDVTFDE 584


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score =  104 bits (259), Expect = 8e-21
 Identities = 43/71 (60%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 EQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTNR 35
           E+LFH +PD S LR+FGC C+P+LRPYN HK+ FRS  C+FLGYSS H G++CLD +T R
Sbjct: 514 ERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGR 573

Query: 34  LYIARHVRFNE 2
           +Y++R V F+E
Sbjct: 574 VYVSRDVTFDE 584


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/72 (61%), Positives = 58/72 (80%)
 Frame = -2

Query: 217 LEQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTN 38
           LE+LF+ KPD S LRVFGC C+PHLRPYN HK+ FRS  C+FLG+S+ H G++CLD ++ 
Sbjct: 666 LEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSG 725

Query: 37  RLYIARHVRFNE 2
           R+YI+R V F+E
Sbjct: 726 RVYISRDVVFDE 737


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