BLASTX nr result
ID: Atractylodes21_contig00019990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00019990 (218 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 105 3e-21 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 104 6e-21 gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 104 8e-21 gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 104 8e-21 gb|AAB82754.1| retrofit [Oryza longistaminata] 103 1e-20 >gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1447 Score = 105 bits (263), Expect = 3e-21 Identities = 46/72 (63%), Positives = 56/72 (77%) Frame = -2 Query: 217 LEQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTN 38 LE LF+ PD S LRVFGC C+PHLRPYN HK+ FRS C FLGYS+ H G++CLDP+T Sbjct: 666 LEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTG 725 Query: 37 RLYIARHVRFNE 2 R+YI+R V F+E Sbjct: 726 RVYISRDVIFDE 737 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 104 bits (260), Expect = 6e-21 Identities = 45/72 (62%), Positives = 57/72 (79%) Frame = -2 Query: 217 LEQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTN 38 LE+L HKPD + LRVFGC C+P+LRPYN HK+ FRS C FLGYS+ H G++CLDP+T Sbjct: 664 LERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTG 723 Query: 37 RLYIARHVRFNE 2 R+YI+R V F+E Sbjct: 724 RVYISRDVVFDE 735 >gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 969 Score = 104 bits (259), Expect = 8e-21 Identities = 43/71 (60%), Positives = 57/71 (80%) Frame = -2 Query: 214 EQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTNR 35 E+LFH +PD S LR+FGC C+P+LRPYN HK+ FRS C+FLGYSS H G++CLD +T R Sbjct: 514 ERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGR 573 Query: 34 LYIARHVRFNE 2 +Y++R V F+E Sbjct: 574 VYVSRDVTFDE 584 >gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1313 Score = 104 bits (259), Expect = 8e-21 Identities = 43/71 (60%), Positives = 57/71 (80%) Frame = -2 Query: 214 EQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTNR 35 E+LFH +PD S LR+FGC C+P+LRPYN HK+ FRS C+FLGYSS H G++CLD +T R Sbjct: 514 ERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGR 573 Query: 34 LYIARHVRFNE 2 +Y++R V F+E Sbjct: 574 VYVSRDVTFDE 584 >gb|AAB82754.1| retrofit [Oryza longistaminata] Length = 1445 Score = 103 bits (258), Expect = 1e-20 Identities = 44/72 (61%), Positives = 58/72 (80%) Frame = -2 Query: 217 LEQLFHHKPDLSFLRVFGCQCFPHLRPYNPHKMDFRSLPCIFLGYSSSHYGYQCLDPTTN 38 LE+LF+ KPD S LRVFGC C+PHLRPYN HK+ FRS C+FLG+S+ H G++CLD ++ Sbjct: 666 LEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSG 725 Query: 37 RLYIARHVRFNE 2 R+YI+R V F+E Sbjct: 726 RVYISRDVVFDE 737