BLASTX nr result

ID: Atractylodes21_contig00019958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019958
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   239   5e-98
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     226   8e-96
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        227   6e-90
ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]...   226   9e-89
ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073...   220   1e-86

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  239 bits (611), Expect(2) = 5e-98
 Identities = 140/222 (63%), Positives = 163/222 (73%), Gaps = 12/222 (5%)
 Frame = -3

Query: 632 DAIEFLPPPPQHQNFEN----HEYRIGDYPNLNVVPGDDLDVDNQEPRVGVSENP--MDL 471
           DAIEFL P  Q+  F +     EYR    P   V+ G  +D  +++     S N   M +
Sbjct: 101 DAIEFLVP--QNPKFPDLPSVDEYR----PEDPVIVGAAMDAVDEDDGFKDSTNVDYMTM 154

Query: 470 IRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI----DR 303
           IRAIERPLKDRE++LEC++R+FY+VL  +TKR+EERQRL SQQRKDGLVAK+R+    DR
Sbjct: 155 IRAIERPLKDRESLLECKNRNFYNVLVMSTKREEERQRLESQQRKDGLVAKSRLMGSDDR 214

Query: 302 GFXXXXXXXXXGT-PRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDGVFIPT 126
           G             P+PKMHLKG KIG+GVPIILVPSA QTLITIYNVKEFLEDGVFIPT
Sbjct: 215 GLVGYGDDLGYDANPKPKMHLKGGKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVFIPT 274

Query: 125 DVKMKQMKGPKPECVTVLKKFS-SRDRVVTAYEVRDKPSALK 3
           DVK+KQMKG +P+CVTV KKFS  RDRVVTAYEVRDKPSALK
Sbjct: 275 DVKVKQMKGARPDCVTVQKKFSRDRDRVVTAYEVRDKPSALK 316



 Score =  145 bits (366), Expect(2) = 5e-98
 Identities = 68/100 (68%), Positives = 86/100 (86%)
 Frame = -2

Query: 972 MDPLTALREMTMRNELDKIVRFENEYRFGSYYSFPCTIETAYRSKQGNLYTLETLVYFIK 793
           MDPL+ALR+ T+R ELDKIVR  +E+RF S YSFPC++ETAYRSKQGNLYTLETLVY+IK
Sbjct: 1   MDPLSALRDFTIRGELDKIVRVNDEFRFASDYSFPCSVETAYRSKQGNLYTLETLVYYIK 60

Query: 792 NVNVKHHDYIRNAGTQKIPAVTLLDRKPLIEYLEGRISST 673
           N +VKH +Y++NA TQ I +VT  DRKPL++YL G++SS+
Sbjct: 61  NHHVKHTEYLQNARTQGITSVTFPDRKPLLDYLTGKVSSS 100


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  226 bits (576), Expect(2) = 8e-96
 Identities = 137/224 (61%), Positives = 158/224 (70%), Gaps = 14/224 (6%)
 Frame = -3

Query: 632 DAIEFLPPP----PQHQNFENHEYRIGDYPNLNVV---PGDDLDVDNQEPRVGVSENPMD 474
           DAIEF+ P     P        EYR  D P L  +   PG +  +DN   R   + + + 
Sbjct: 101 DAIEFVVPQNPKIPDIGVDAVDEYRPED-PTLLAIRDPPGSEDALDNSRVRGFDNVDYIS 159

Query: 473 LIRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI----D 306
           +IRA ERPLKDRE++LEC+ RDFYSVL A+T+R+EER RL S QRKDGLVAK+R+    +
Sbjct: 160 MIRASERPLKDRESLLECKQRDFYSVLMASTRREEERHRLESHQRKDGLVAKSRLMGADE 219

Query: 305 RG---FXXXXXXXXXGTPRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDGVF 135
           RG   +         GTP+PKM L  SKIG+GVPIILVPSA QTLITIYNVKEFLEDGVF
Sbjct: 220 RGLGFWKDGDELGYDGTPKPKMLLNRSKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVF 279

Query: 134 IPTDVKMKQMKGPKPECVTVLKKFSSRDRVVTAYEVRDKPSALK 3
           IPTDVK KQMKG KP+CVTV KKF SRDRVV AYEVRDKPSALK
Sbjct: 280 IPTDVKAKQMKGAKPDCVTVQKKF-SRDRVVMAYEVRDKPSALK 322



 Score =  151 bits (382), Expect(2) = 8e-96
 Identities = 69/100 (69%), Positives = 90/100 (90%)
 Frame = -2

Query: 972 MDPLTALREMTMRNELDKIVRFENEYRFGSYYSFPCTIETAYRSKQGNLYTLETLVYFIK 793
           MDPL+ALR+ T+R ELDKIVR  +E+RFGS Y+FPC+ ETAYRSKQGNLYTLETLVY++K
Sbjct: 1   MDPLSALRDFTVRGELDKIVRVGDEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVK 60

Query: 792 NVNVKHHDYIRNAGTQKIPAVTLLDRKPLIEYLEGRISST 673
           N ++KH +Y+++A TQ+IPAVTL DRKPL+EYL+G+++ST
Sbjct: 61  NHHIKHTEYLQSARTQRIPAVTLPDRKPLLEYLQGKVAST 100


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  227 bits (579), Expect(2) = 6e-90
 Identities = 122/190 (64%), Positives = 147/190 (77%), Gaps = 5/190 (2%)
 Frame = -3

Query: 557 PNLNVVPGDDLDVDNQEPRVGVSENPMDLIRAIERPLKDRETILECRHRDFYSVLTAATK 378
           PN   +P +DL++D            + +IR+ E+PLKDR+++LEC++RDFYSVL +ATK
Sbjct: 121 PNPPSLPPEDLNLDF-----------ISMIRSAEKPLKDRQSLLECKNRDFYSVLVSATK 169

Query: 377 RDEERQRLGSQQRKDGLVAKNRI----DRGFXXXXXXXXXG-TPRPKMHLKGSKIGDGVP 213
           R+EERQR+ S QRKDGLVAK+R+    DRG            TP+PKMHLKG+KIG+GVP
Sbjct: 170 REEERQRMESHQRKDGLVAKSRLMGSDDRGLGFSDDMGGYDPTPKPKMHLKGTKIGEGVP 229

Query: 212 IILVPSASQTLITIYNVKEFLEDGVFIPTDVKMKQMKGPKPECVTVLKKFSSRDRVVTAY 33
           IILVPSA QTLITIYNVKEFLEDGV+IPTDVK+KQMKG +P+CVTV KK  SRDRVVTAY
Sbjct: 230 IILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMKGARPDCVTVQKKL-SRDRVVTAY 288

Query: 32  EVRDKPSALK 3
           EVRDKPS LK
Sbjct: 289 EVRDKPSTLK 298



 Score =  130 bits (328), Expect(2) = 6e-90
 Identities = 61/100 (61%), Positives = 81/100 (81%)
 Frame = -2

Query: 972 MDPLTALREMTMRNELDKIVRFENEYRFGSYYSFPCTIETAYRSKQGNLYTLETLVYFIK 793
           MDPL+ALRE TMR E++KIVR   E+RFG  Y+FPC +ETAYRS +GN YTLETLV++I+
Sbjct: 1   MDPLSALREFTMRGEVEKIVRVNAEFRFGEEYTFPCWVETAYRSTKGNRYTLETLVHYIQ 60

Query: 792 NVNVKHHDYIRNAGTQKIPAVTLLDRKPLIEYLEGRISST 673
           N ++KH +YI+N     IP+VTL DRKPL++YL+G +SS+
Sbjct: 61  NHHLKHTEYIQNTFAVGIPSVTLPDRKPLLQYLQGTLSSS 100


>ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]
           gi|222864802|gb|EEF01933.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 405

 Score =  226 bits (577), Expect(2) = 9e-89
 Identities = 130/216 (60%), Positives = 151/216 (69%), Gaps = 6/216 (2%)
 Frame = -3

Query: 632 DAIEFLPPPPQHQNFENHEYRIGDYPNLNVVPGDDLDVDNQEPRVGVSENPMDLIRAIER 453
           D+I F  P PQ     N  YR  D   L+    D    D         EN + LI A ER
Sbjct: 101 DSIVF--PLPQESQNPNLNYRPDDPMLLDSRIDDSAAADKVNNGNEGVENHVSLIYANER 158

Query: 452 PLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI----DRGFXXXX 285
           PLKDRE++LEC++RDFY VL A+T+R+EER +  SQQRKDGLVAK+R+    +RG     
Sbjct: 159 PLKDRESLLECKNRDFYGVLVASTRREEERHKFESQQRKDGLVAKSRLMGTDERGIGYGG 218

Query: 284 XXXXXGTP-RPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDGVFIPTDVKMKQ 108
                 +  +PKMH KG KIG+GVPIILVPSA QTLITIYNVKEFLEDG+FIPTDVK KQ
Sbjct: 219 DELGYDSAAKPKMHSKGGKIGEGVPIILVPSAFQTLITIYNVKEFLEDGIFIPTDVKAKQ 278

Query: 107 MKGPKPECVTVLKKFSS-RDRVVTAYEVRDKPSALK 3
           MKGPKPECVTV KKFS+ R+RV+TAYEVRDKPSALK
Sbjct: 279 MKGPKPECVTVQKKFSTDRNRVMTAYEVRDKPSALK 314



 Score =  127 bits (320), Expect(2) = 9e-89
 Identities = 59/100 (59%), Positives = 80/100 (80%)
 Frame = -2

Query: 972 MDPLTALREMTMRNELDKIVRFENEYRFGSYYSFPCTIETAYRSKQGNLYTLETLVYFIK 793
           MDPL+ALR+ T+R +LDKI+R  +E+RFG+ Y+FPC+ +TAYRSKQGNLYTLETLVY I+
Sbjct: 1   MDPLSALRDFTIRGDLDKIIRINDEFRFGNEYTFPCSTKTAYRSKQGNLYTLETLVYCIQ 60

Query: 792 NVNVKHHDYIRNAGTQKIPAVTLLDRKPLIEYLEGRISST 673
           N  +K  +Y+++A    IP VT +D KP+ EYL G++SST
Sbjct: 61  NTKIKFTNYLQDALALGIPPVTYIDWKPVKEYLSGKLSST 100


>ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073460|gb|ACJ85089.1|
           unknown [Medicago truncatula]
           gi|355512117|gb|AES93740.1| Parafibromin [Medicago
           truncatula] gi|388521181|gb|AFK48652.1| unknown
           [Medicago truncatula]
          Length = 398

 Score =  220 bits (560), Expect(2) = 1e-86
 Identities = 122/213 (57%), Positives = 150/213 (70%), Gaps = 3/213 (1%)
 Frame = -3

Query: 632 DAIEFLPPPPQHQNFENHEYRIGDYPNLNVVPGDDLDVDNQEPRVGVSENPMDLIRAIER 453
           D+IE+LP  P   +  +   +   +PN      D++  + + P +      + +IR  E+
Sbjct: 108 DSIEYLPEQPSIPDEPSSHQQHSQFPN-----SDEIITELESPPLDF----ISMIRTAEK 158

Query: 452 PLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI---DRGFXXXXX 282
           PLKDRE++LEC++RDFYSVL AATKR+EERQR  S QRKDGLVAK+R+      F     
Sbjct: 159 PLKDRESLLECKNRDFYSVLVAATKREEERQRAESHQRKDGLVAKSRLLGSADDFGGDEM 218

Query: 281 XXXXGTPRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDGVFIPTDVKMKQMK 102
                TP+PKMHLK   IG+GVPIILVPSA QTLITIYNVK+FLEDGV++PTDVK+K MK
Sbjct: 219 GYDHQTPKPKMHLK---IGEGVPIILVPSAFQTLITIYNVKDFLEDGVYVPTDVKVKAMK 275

Query: 101 GPKPECVTVLKKFSSRDRVVTAYEVRDKPSALK 3
           G KP+CVTV KK  SRDR VTAYEVRDKPSALK
Sbjct: 276 GAKPDCVTVQKKL-SRDRAVTAYEVRDKPSALK 307



 Score =  127 bits (319), Expect(2) = 1e-86
 Identities = 59/106 (55%), Positives = 79/106 (74%)
 Frame = -2

Query: 990 NSTHTAMDPLTALREMTMRNELDKIVRFENEYRFGSYYSFPCTIETAYRSKQGNLYTLET 811
           N     MDPLT LR+ T+R +LDKIVR    +RFG  Y+FPC++ETAYRS +GN YTLET
Sbjct: 2   NPMRMRMDPLTLLRDFTIRGDLDKIVRLNGNFRFGEDYTFPCSLETAYRSTKGNRYTLET 61

Query: 810 LVYFIKNVNVKHHDYIRNAGTQKIPAVTLLDRKPLIEYLEGRISST 673
           LV++IKN ++KH +Y +N     IP+VTL DRKP++ YL+G +S+T
Sbjct: 62  LVHYIKNHHLKHTEYFQNTLALGIPSVTLPDRKPILNYLQGILSTT 107


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