BLASTX nr result

ID: Atractylodes21_contig00019911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019911
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   326   2e-87
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   308   9e-82
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   306   3e-81
ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin...   300   2e-79
emb|CBI33870.3| unnamed protein product [Vitis vinifera]              293   2e-77

>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score =  326 bits (836), Expect = 2e-87
 Identities = 159/218 (72%), Positives = 178/218 (81%), Gaps = 10/218 (4%)
 Frame = +2

Query: 32  MDYGRESGNVVQIITGGGGSRNGADYWGDQPVWATEDEYGVWDREASVDTTSNSNYDGRA 211
           MD GRE+G    +   GGG  N      DQ VWATED+Y VW+ + S DT SNSNY+GR 
Sbjct: 1   MDNGREAGFSGSV---GGGVDNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQ 57

Query: 212 SQTRSGSEPPNKKTRNGQSGDAQA----------TSRAKAIGKMFFKTKLCCKFRAGTCP 361
           SQ+RSGSEPPNKK+RN Q  D+Q           ++R+KAIGKMFFKTKLCCKFRAGTCP
Sbjct: 58  SQSRSGSEPPNKKSRNSQVVDSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCP 117

Query: 362 YITNCNFAHSIEELRRPPPNWQEIVAAHEEERAVSSEPREEFQIPSLGSSSFTVDSQRSY 541
           Y+TNCNFAHSI+ELRRPPPNWQEIVAAH+EER VSSEPREEFQIPS+GSSSF V++QRSY
Sbjct: 118 YVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIPSIGSSSFGVETQRSY 177

Query: 542 KGRHCKKFYTEEGCPYGDNCTFLHDEQSKARESVVISL 655
           KGRHCKKFYT+EGCPYGDNCTFLHDEQSKARESV ISL
Sbjct: 178 KGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAISL 215


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  308 bits (788), Expect = 9e-82
 Identities = 154/210 (73%), Positives = 172/210 (81%), Gaps = 2/210 (0%)
 Frame = +2

Query: 32  MDYGRESGNVVQIITGGGGSRNGADYWGDQPVWATEDEYGVWDR--EASVDTTSNSNYDG 205
           MDY    GNVV +I+G          W  + VWATEDEY  W+   + SVDT SNS+YD 
Sbjct: 1   MDYS--GGNVVHVISGTSNEN-----WPGE-VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52

Query: 206 RASQTRSGSEPPNKKTRNGQSGDAQATSRAKAIGKMFFKTKLCCKFRAGTCPYITNCNFA 385
           R SQ+RSGSEPPNKK+R+ Q  D  +++R+KAIGKMFFKTKLCCKFRAGTCPYITNCNFA
Sbjct: 53  RQSQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFA 110

Query: 386 HSIEELRRPPPNWQEIVAAHEEERAVSSEPREEFQIPSLGSSSFTVDSQRSYKGRHCKKF 565
           HSIEELRRPP NWQEIVAAHEEE+AV SEPREEFQIPSLG+S+F  +SQRSYKGRHCKKF
Sbjct: 111 HSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKF 170

Query: 566 YTEEGCPYGDNCTFLHDEQSKARESVVISL 655
           YTEEGCPYGD+CTFLHDEQSK RESV ISL
Sbjct: 171 YTEEGCPYGDSCTFLHDEQSKNRESVAISL 200


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  306 bits (784), Expect = 3e-81
 Identities = 153/209 (73%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
 Frame = +2

Query: 32  MDYGRESGNVVQIITGGGGSRNGADYWGDQPVWATEDEYGVWDR--EASVDTTSNSNYDG 205
           MDY    GNVV +I+G          W  + VWATEDEY  W+   + SVDT SNS+YD 
Sbjct: 1   MDYS--GGNVVHVISGTSNEN-----WPGE-VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52

Query: 206 RASQTRSGSEPPNKKTRNGQSGDAQATSRAKAIGKMFFKTKLCCKFRAGTCPYITNCNFA 385
           R SQ+RSGSEPPNKK+R+ Q  D  +++R+KAIGKMFFKTKLCCKFRAGTCPYITNCNFA
Sbjct: 53  RQSQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFA 110

Query: 386 HSIEELRRPPPNWQEIVAAHEEERAVSSEPREEFQIPSLGSSSFTVDSQRSYKGRHCKKF 565
           HSIEELRRPP NWQEIVAAHEEE+AV SEPREEFQIPSLG+S+F  +SQRSYKGRHCKKF
Sbjct: 111 HSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKF 170

Query: 566 YTEEGCPYGDNCTFLHDEQSKARESVVIS 652
           YTEEGCPYGD+CTFLHDEQSK RESV IS
Sbjct: 171 YTEEGCPYGDSCTFLHDEQSKNRESVAIS 199


>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Glycine max]
          Length = 368

 Score =  300 bits (767), Expect = 2e-79
 Identities = 153/215 (71%), Positives = 174/215 (80%), Gaps = 7/215 (3%)
 Frame = +2

Query: 32  MDYGRESGNVVQIITGGGGSRNGADYW-GDQPVWATEDEYGVWDREAS----VDTTSNSN 196
           MD+ R+ GNVVQIITGGGG   G + W GDQ  WATEDEY  W+   S      T SNSN
Sbjct: 1   MDFARD-GNVVQIITGGGGGGGGGESWSGDQADWATEDEYRFWNNNNSGGDSETTPSNSN 59

Query: 197 YDGRASQTRSGSEPPNKKTRNGQSGDAQATSRAKAIGKMFFKTKLCCKFRAGTCPYITNC 376
           Y+GR+S      EPP+KK+RN  S +  +++R+KAIGKMFFKTKLCCKFRAGTCPYITNC
Sbjct: 60  YEGRSS------EPPSKKSRNS-SQEGSSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 112

Query: 377 NFAHSIEELRRPPPNWQEIVAAHEEERAVSSE-PREEFQIPSLGSSSFTVD-SQRSYKGR 550
           NFAHSIEELRRPPPNWQEIVAAHEEE+AV  E PREEFQIP++GS++F+ +  QRSYKGR
Sbjct: 113 NFAHSIEELRRPPPNWQEIVAAHEEEKAVMIEPPREEFQIPTVGSTTFSGEMMQRSYKGR 172

Query: 551 HCKKFYTEEGCPYGDNCTFLHDEQSKARESVVISL 655
           HCKKFYTEEGCPYGD+CTFLHDEQSK RESV ISL
Sbjct: 173 HCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISL 207


>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  293 bits (750), Expect = 2e-77
 Identities = 146/208 (70%), Positives = 164/208 (78%)
 Frame = +2

Query: 32  MDYGRESGNVVQIITGGGGSRNGADYWGDQPVWATEDEYGVWDREASVDTTSNSNYDGRA 211
           MD GRE+G    +   GGG  N      DQ VWATED+Y VW+ + S DT SNSNY+GR 
Sbjct: 1   MDNGREAGFSGSV---GGGVDNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQ 57

Query: 212 SQTRSGSEPPNKKTRNGQSGDAQATSRAKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHS 391
           SQ+             G+  D  + +R+KAIGKMFFKTKLCCKFRAGTCPY+TNCNFAHS
Sbjct: 58  SQSNVF----------GRDRDLPS-NRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHS 106

Query: 392 IEELRRPPPNWQEIVAAHEEERAVSSEPREEFQIPSLGSSSFTVDSQRSYKGRHCKKFYT 571
           I+ELRRPPPNWQEIVAAH+EER VSSEPREEFQIPS+GSSSF V++QRSYKGRHCKKFYT
Sbjct: 107 IQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYT 166

Query: 572 EEGCPYGDNCTFLHDEQSKARESVVISL 655
           +EGCPYGDNCTFLHDEQSKARESV ISL
Sbjct: 167 DEGCPYGDNCTFLHDEQSKARESVAISL 194


Top