BLASTX nr result

ID: Atractylodes21_contig00019863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019863
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524711.1| PREDICTED: putative DNA-binding protein ESCA...    70   2e-10
ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...    67   1e-09
emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]    67   1e-09
gb|ABL63117.1| AT-hook DNA-binding protein, partial [Catharanthu...    65   4e-09
ref|XP_003608618.1| AT-hook DNA-binding protein [Medicago trunca...    65   6e-09

>ref|XP_003524711.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 276

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/78 (52%), Positives = 48/78 (61%)
 Frame = -3

Query: 496 IVIASSFTNVAYXXXXXXXXXXEGAGLQMQQPASQTDXXXXXXXXXXGINSNNPFPDPSS 317
           IVIA+SFTNVAY          +   LQ+Q PA+ +             N+NNPFPDPSS
Sbjct: 207 IVIAASFTNVAYERLPLEEDEQQQQQLQIQSPATTSSQGN---------NNNNPFPDPSS 257

Query: 316 GLPFFNLPLSMPPNVQLP 263
           GLPFFNLPL+M  NVQLP
Sbjct: 258 GLPFFNLPLNM-QNVQLP 274


>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/80 (52%), Positives = 46/80 (57%)
 Frame = -3

Query: 496 IVIASSFTNVAYXXXXXXXXXXEGAGLQMQQPASQTDXXXXXXXXXXGINSNNPFPDPSS 317
           IVIA+SFTNVAY              LQMQQ   Q+               NNPFPDPS+
Sbjct: 203 IVIAASFTNVAYERLPLDEEEP----LQMQQQVPQSSGGGGGGI-------NNPFPDPSA 251

Query: 316 GLPFFNLPLSMPPNVQLPVD 257
           GLPFFNLPL+M PN QLPVD
Sbjct: 252 GLPFFNLPLNM-PNCQLPVD 270


>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/80 (52%), Positives = 46/80 (57%)
 Frame = -3

Query: 496 IVIASSFTNVAYXXXXXXXXXXEGAGLQMQQPASQTDXXXXXXXXXXGINSNNPFPDPSS 317
           IVIA+SFTNVAY              LQMQQ   Q+               NNPFPDPS+
Sbjct: 203 IVIAASFTNVAYERLPLDEEEP----LQMQQQVPQSSGGGGGGI-------NNPFPDPSA 251

Query: 316 GLPFFNLPLSMPPNVQLPVD 257
           GLPFFNLPL+M PN QLPVD
Sbjct: 252 GLPFFNLPLNM-PNCQLPVD 270


>gb|ABL63117.1| AT-hook DNA-binding protein, partial [Catharanthus roseus]
          Length = 250

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/80 (52%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = -3

Query: 496 IVIASSFTNVAYXXXXXXXXXXEGAGLQMQQPASQTDXXXXXXXXXXGINSNNP--FPDP 323
           IVIASSFTNVAY          +   LQ+  P SQ            GIN+NN   FPDP
Sbjct: 171 IVIASSFTNVAYERLPLEEEEQQQ--LQILPPVSQGSGAVAAGGGGEGINNNNTATFPDP 228

Query: 322 SSGLPFFNLPLSMPPNVQLP 263
           SSGLPFFNLPL+  PN QLP
Sbjct: 229 SSGLPFFNLPLNNMPNCQLP 248


>ref|XP_003608618.1| AT-hook DNA-binding protein [Medicago truncatula]
           gi|355509673|gb|AES90815.1| AT-hook DNA-binding protein
           [Medicago truncatula]
          Length = 285

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/80 (50%), Positives = 44/80 (55%)
 Frame = -3

Query: 496 IVIASSFTNVAYXXXXXXXXXXEGAGLQMQQPASQTDXXXXXXXXXXGINSNNPFPDPSS 317
           IVIA+SFTNVAY               Q+Q  A              G N+NNPFPDPSS
Sbjct: 198 IVIAASFTNVAYEKLPLEEE-------QLQMQAEAGGGSQGSGGGGGGNNNNNPFPDPSS 250

Query: 316 GLPFFNLPLSMPPNVQLPVD 257
           GLPFFNLPL+M    QLPVD
Sbjct: 251 GLPFFNLPLNMQNVHQLPVD 270


Top