BLASTX nr result

ID: Atractylodes21_contig00019829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019829
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530999.1| Mitochondrial carnitine/acylcarnitine carrie...    87   3e-25
gb|ABD96928.1| hypothetical protein [Cleome spinosa]                   89   2e-24
ref|XP_002306057.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-22
ref|XP_003633751.1| PREDICTED: solute carrier family 25 member 4...    82   4e-22
ref|XP_002277875.1| PREDICTED: solute carrier family 25 member 4...    82   4e-22

>ref|XP_002530999.1| Mitochondrial carnitine/acylcarnitine carrier protein, putative
           [Ricinus communis] gi|223529426|gb|EEF31387.1|
           Mitochondrial carnitine/acylcarnitine carrier protein,
           putative [Ricinus communis]
          Length = 339

 Score = 87.0 bits (214), Expect(2) = 3e-25
 Identities = 45/65 (69%), Positives = 50/65 (76%)
 Frame = -1

Query: 527 RGFVMVIT*AIPAMIIFLIALETTKVVVFKMVEPFKISDPIKVAIANGLARMTTSLFP*G 348
           +GF  VIT AIPA IIFL ALETTKV  FKMVEPFK+SDP + A ANG+A MT SLF   
Sbjct: 81  KGFGTVITGAIPARIIFLTALETTKVAAFKMVEPFKLSDPSQAAFANGIAGMTASLFSQA 140

Query: 347 VFVPI 333
           VFVP+
Sbjct: 141 VFVPV 145



 Score = 55.5 bits (132), Expect(2) = 3e-25
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = -3

Query: 645 IYPISVVKTRK*VSTKDFVEKGAFAVVQGLLRTEGIQG 532
           +YP+SVVKTR  V+TKD VEK AF+VV+GLLRT+GI G
Sbjct: 41  LYPMSVVKTRLQVATKDTVEKSAFSVVRGLLRTDGIPG 78


>gb|ABD96928.1| hypothetical protein [Cleome spinosa]
          Length = 321

 Score = 88.6 bits (218), Expect(2) = 2e-24
 Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
 Frame = -1

Query: 527 RGFVMVIT*AIPAMIIFLIALETTKVVVFKMVEPFKISDPIKVAIANGLARMTTSLFP*G 348
           RGF  VIT AIPA IIFL ALETTK+  FK+VEPFK S+P + AIANG+A MT SLF   
Sbjct: 81  RGFGTVITGAIPARIIFLTALETTKIAAFKLVEPFKFSEPTQAAIANGIAGMTASLFSQA 140

Query: 347 VFVPI------ISVVGFYEHNT 300
           VFVPI      + V GF  H T
Sbjct: 141 VFVPIDVVSQKLMVQGFSGHAT 162



 Score = 51.2 bits (121), Expect(2) = 2e-24
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 645 IYPISVVKTRK*VSTKDFVEKGAFAVVQGLLRTEGIQGQQR 523
           +YP+SVVKTR  V++KD  E+ AF+VV+GLL+ EGI G  R
Sbjct: 41  LYPVSVVKTRLQVASKDVAERNAFSVVKGLLKNEGIPGLYR 81


>ref|XP_002306057.1| predicted protein [Populus trichocarpa] gi|222849021|gb|EEE86568.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 80.1 bits (196), Expect(2) = 3e-22
 Identities = 42/65 (64%), Positives = 47/65 (72%)
 Frame = -1

Query: 527 RGFVMVIT*AIPAMIIFLIALETTKVVVFKMVEPFKISDPIKVAIANGLARMTTSLFP*G 348
           RGF  VIT A+PA IIFL ALETTKV  FKMVEPF  S+P + A+ANG+A M  SL    
Sbjct: 76  RGFGTVITGAVPARIIFLTALETTKVTAFKMVEPFNFSEPTQAALANGIAGMAASLCSQA 135

Query: 347 VFVPI 333
           VFVPI
Sbjct: 136 VFVPI 140



 Score = 52.0 bits (123), Expect(2) = 3e-22
 Identities = 22/42 (52%), Positives = 34/42 (80%)
 Frame = -3

Query: 648 GIYPISVVKTRK*VSTKDFVEKGAFAVVQGLLRTEGIQGQQR 523
           G+YP+SV+KTR  V+T+D VEK A +V++G+L+T+G+ G  R
Sbjct: 35  GLYPVSVIKTRLQVATRDSVEKSASSVIRGILKTDGVPGLYR 76


>ref|XP_003633751.1| PREDICTED: solute carrier family 25 member 44-like isoform 2 [Vitis
           vinifera] gi|298204467|emb|CBI16947.3| unnamed protein
           product [Vitis vinifera]
          Length = 323

 Score = 81.6 bits (200), Expect(2) = 4e-22
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = -1

Query: 527 RGFVMVIT*AIPAMIIFLIALETTKVVVFKMVEPFKISDPIKVAIANGLARMTTSLFP*G 348
           RGF  VIT A+PA IIFL ALET+KV  FKMVEPFK+S+  + A+ANG+A +T++LF   
Sbjct: 81  RGFGTVITGAVPARIIFLTALETSKVAAFKMVEPFKLSETTQAAVANGIAGLTSALFSQA 140

Query: 347 VFVPI 333
           VFVPI
Sbjct: 141 VFVPI 145



 Score = 50.1 bits (118), Expect(2) = 4e-22
 Identities = 22/42 (52%), Positives = 33/42 (78%)
 Frame = -3

Query: 648 GIYPISVVKTRK*VSTKDFVEKGAFAVVQGLLRTEGIQGQQR 523
           G+YP+SV+KTR  V++ D VE+ AF+V++G+LR +GI G  R
Sbjct: 40  GLYPVSVIKTRLQVASGDAVERNAFSVIKGILRMDGIPGLYR 81


>ref|XP_002277875.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis
           vinifera]
          Length = 320

 Score = 81.6 bits (200), Expect(2) = 4e-22
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = -1

Query: 527 RGFVMVIT*AIPAMIIFLIALETTKVVVFKMVEPFKISDPIKVAIANGLARMTTSLFP*G 348
           RGF  VIT A+PA IIFL ALET+KV  FKMVEPFK+S+  + A+ANG+A +T++LF   
Sbjct: 81  RGFGTVITGAVPARIIFLTALETSKVAAFKMVEPFKLSETTQAAVANGIAGLTSALFSQA 140

Query: 347 VFVPI 333
           VFVPI
Sbjct: 141 VFVPI 145



 Score = 50.1 bits (118), Expect(2) = 4e-22
 Identities = 22/42 (52%), Positives = 33/42 (78%)
 Frame = -3

Query: 648 GIYPISVVKTRK*VSTKDFVEKGAFAVVQGLLRTEGIQGQQR 523
           G+YP+SV+KTR  V++ D VE+ AF+V++G+LR +GI G  R
Sbjct: 40  GLYPVSVIKTRLQVASGDAVERNAFSVIKGILRMDGIPGLYR 81


Top