BLASTX nr result

ID: Atractylodes21_contig00019814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019814
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   493   e-137
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   465   e-129
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   463   e-128
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   460   e-127

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  493 bits (1269), Expect = e-137
 Identities = 270/376 (71%), Positives = 290/376 (77%), Gaps = 8/376 (2%)
 Frame = +1

Query: 1    ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNDTLKNPDKKKDIEKLLNPIPSN 180
            ETRAAYEAMLSVIQQQLGGQPLNIVS AADEILAVLKN+T+KNPDKKK+IE+LLNPIP++
Sbjct: 119  ETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNETVKNPDKKKEIERLLNPIPNH 178

Query: 181  LFDQLVSIGRLITDFQDAAAANG-----GEDALDDDVGVAVXXXXXXXXXXXSDLDIVQX 345
            +FDQLVSIGRLITDFQD   A G     G+DALDDDVGVAV           SDLD+VQ 
Sbjct: 179  IFDQLVSIGRLITDFQDGGDAAGPTAANGDDALDDDVGVAVEFEENEDEEEESDLDMVQE 238

Query: 346  XXXXXXXXXXVLDN-AXXXXXXXXXXXLQEANEGMTLNVQDIDAYWLQRKISQAYEHQID 522
                         + A           +QEANEGMTLNVQDIDAYWLQRKISQAYE QID
Sbjct: 239  DEEEDDDVMEQNGSGAMQMGGGIDDDDMQEANEGMTLNVQDIDAYWLQRKISQAYEQQID 298

Query: 523  SQQSQKLAEEVLKILEEGDDHEVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEH 702
             QQ QKLAEEVLKIL EGDD EVETKLLVHLQFDKFSLIK+LLRNRLKIVWCTRLARAE 
Sbjct: 299  PQQCQKLAEEVLKILAEGDDREVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAED 358

Query: 703  QEQRKTIEGKMMGLAPALAAILEQLHATRATAKERQKNLEKSIREEARRLKDESG--GXX 876
            QE+RK IE +M G    LAAILEQLHATRATAKERQK LEKSIREEARRLKDESG  G  
Sbjct: 359  QEERKKIEEEMTGSGSDLAAILEQLHATRATAKERQKILEKSIREEARRLKDESGGDGDR 418

Query: 877  XXXXXXXXXAENGWLNGQRQLLDLESIVFHQGGLLMANKKCELPLGSYRNNCKGYEEVHV 1056
                     AE+GWL GQRQLLDL+ I FHQGG LMANKKCELP GSYR++ KGYEEVHV
Sbjct: 419  DRRGPVDRDAESGWLKGQRQLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHV 478

Query: 1057 PALKPKPLAADEKLIK 1104
            PALK   L   E+L+K
Sbjct: 479  PALKAAALGPGEELVK 494


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  471 bits (1212), Expect = e-130
 Identities = 256/377 (67%), Positives = 290/377 (76%), Gaps = 9/377 (2%)
 Frame = +1

Query: 1    ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNDTLKNPDKKKDIEKLLNPIPSN 180
            ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKN++++  DK+K+IEKLLNPIP+N
Sbjct: 118  ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNESVRTQDKRKEIEKLLNPIPNN 177

Query: 181  LFDQLVSIGRLITDFQDA-----AAANGGEDALDDDVGVAVXXXXXXXXXXX-SDLDIV- 339
            +F+Q+VSIGRLITD+QDA     A+   G+DALDD VGVAV            SDLD+V 
Sbjct: 178  MFEQVVSIGRLITDYQDAGDGAGASVANGDDALDDGVGVAVEFDEDNEDEEEDSDLDMVP 237

Query: 340  QXXXXXXXXXXXVLDNAXXXXXXXXXXXLQEANEGMTLNVQDIDAYWLQRKISQAYEHQI 519
            +               A           + EANEG+ LNVQDIDAYWLQRKIS AYE QI
Sbjct: 238  EEEEEEDDVVEPGGSGAMQMGGGIDDDEMGEANEGLNLNVQDIDAYWLQRKISLAYEQQI 297

Query: 520  DSQQSQKLAEEVLKILEEGDDHEVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAE 699
            D QQ QKLAEEVLKIL EGDD EVETKLLVHLQFDKFSLIK+LLRNRLKIVWCTRLARA+
Sbjct: 298  DPQQCQKLAEEVLKILAEGDDREVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAK 357

Query: 700  HQEQRKTIEGKMMGLAPALAAILEQLHATRATAKERQKNLEKSIREEARRLKDESG--GX 873
             QE+RK IE +MMGL P LA ILEQLHATRATAKERQKNLEKSIREEARRLKDE+G  G 
Sbjct: 358  DQEERKQIEEEMMGLGPDLAGILEQLHATRATAKERQKNLEKSIREEARRLKDETGGDGD 417

Query: 874  XXXXXXXXXXAENGWLNGQRQLLDLESIVFHQGGLLMANKKCELPLGSYRNNCKGYEEVH 1053
                      AE+GW+ GQ Q+LDL+SI F QGGLLMANKKC+LP+GS+++  KGYEEVH
Sbjct: 418  RDRRGLVDRDAESGWVKGQPQMLDLDSIAFEQGGLLMANKKCDLPVGSFKHQKKGYEEVH 477

Query: 1054 VPALKPKPLAADEKLIK 1104
            VPALK KP+  DE+ +K
Sbjct: 478  VPALKQKPIPPDERFVK 494


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score =  465 bits (1197), Expect = e-129
 Identities = 257/376 (68%), Positives = 282/376 (75%), Gaps = 8/376 (2%)
 Frame = +1

Query: 1    ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNDTLKNPDKKKDIEKLLNPIPSN 180
            ETRAAYEAMLSVIQQQLGGQPL+IVS AADEILAVLKND+ KNPDKKK+IEKLLNPIP+N
Sbjct: 118  ETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLLNPIPNN 177

Query: 181  LFDQLVSIGRLITDFQDAAAANG-----GEDALDDDVGVAVXXXXXXXXXXXSDLDIVQX 345
            +FDQLVSIGRLITD+QD   A G     G+ ALDDD+GVAV           SDLD+VQ 
Sbjct: 178  VFDQLVSIGRLITDYQDGNDATGPATANGDGALDDDIGVAVEFEENEEEEE-SDLDMVQE 236

Query: 346  XXXXXXXXXXVLDN-AXXXXXXXXXXXLQEANEGMTLNVQDIDAYWLQRKISQAYEHQID 522
                         + A           LQE + GM LNVQDIDAYWLQRKISQAYE QID
Sbjct: 237  DEEDEDDVAEPNGSGAMQMDGGIDDDDLQENDGGMNLNVQDIDAYWLQRKISQAYEQQID 296

Query: 523  SQQSQKLAEEVLKILEEGDDHEVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEH 702
             QQ QKLAEEVLKIL EGDD E+ETKLLVHLQF+KFSL+K+LLRNRLK+VWCTRLAR+E 
Sbjct: 297  PQQCQKLAEEVLKILAEGDDREIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSED 356

Query: 703  QEQRKTIEGKMMGLAPALAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG--XX 876
            QE+RK IE +MM L P LAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG    
Sbjct: 357  QEERKKIEEEMMHLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGGDAER 416

Query: 877  XXXXXXXXXAENGWLNGQRQLLDLESIVFHQGGLLMANKKCELPLGSYRNNCKGYEEVHV 1056
                      +NG L GQ QLLDL+SI F QG LLMAN KC LP GSYR+  KGYEE+HV
Sbjct: 417  GRRDPVERDMDNGGLTGQSQLLDLDSIAFQQGSLLMANNKCVLPDGSYRHLGKGYEEIHV 476

Query: 1057 PALKPKPLAADEKLIK 1104
            P L  KP  +DEK +K
Sbjct: 477  PKLNAKPFGSDEKFVK 492


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score =  463 bits (1191), Expect = e-128
 Identities = 256/376 (68%), Positives = 281/376 (74%), Gaps = 8/376 (2%)
 Frame = +1

Query: 1    ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNDTLKNPDKKKDIEKLLNPIPSN 180
            ETRAAYEAMLSVIQQQLGGQPL+IVS AADEILAVLKND+ KNPDKKK+IEKLLNPIP+N
Sbjct: 118  ETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLLNPIPNN 177

Query: 181  LFDQLVSIGRLITDFQDAAAANG-----GEDALDDDVGVAVXXXXXXXXXXXSDLDIVQX 345
            +FDQLVSIGRLITD+QD   A G     G+ ALDDD+GVAV           SDLD+VQ 
Sbjct: 178  VFDQLVSIGRLITDYQDGNDATGPATANGDGALDDDIGVAVEFEENEEEEE-SDLDMVQE 236

Query: 346  XXXXXXXXXXVLDN-AXXXXXXXXXXXLQEANEGMTLNVQDIDAYWLQRKISQAYEHQID 522
                         + A           LQE + GM LNVQDIDAYWLQRKISQAYE QID
Sbjct: 237  DEEDEDDVAEPNGSGAMQMDGGIDDDDLQENDGGMNLNVQDIDAYWLQRKISQAYEQQID 296

Query: 523  SQQSQKLAEEVLKILEEGDDHEVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEH 702
             QQ QKLAEEVLKIL EGDD E+ETKLLVHLQF+KFSL+K+LLRNRLK+VWCTRLAR+E 
Sbjct: 297  PQQCQKLAEEVLKILAEGDDREIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSED 356

Query: 703  QEQRKTIEGKMMGLAPALAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG--XX 876
            QE+R  IE +MM L P LAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG    
Sbjct: 357  QEERXKIEEEMMHLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGGDAER 416

Query: 877  XXXXXXXXXAENGWLNGQRQLLDLESIVFHQGGLLMANKKCELPLGSYRNNCKGYEEVHV 1056
                      +NG L GQ QLLDL+SI F QG LLMAN KC LP GSYR+  KGYEE+HV
Sbjct: 417  GRRDPVERDMDNGGLTGQSQLLDLDSIAFQQGSLLMANNKCVLPDGSYRHLGKGYEEIHV 476

Query: 1057 PALKPKPLAADEKLIK 1104
            P L  KP  +DEK +K
Sbjct: 477  PKLNAKPFGSDEKFVK 492


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  460 bits (1183), Expect = e-127
 Identities = 251/381 (65%), Positives = 281/381 (73%), Gaps = 13/381 (3%)
 Frame = +1

Query: 1    ETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNDTLKNPDKKKDIEKLLNPIPSN 180
            ETRAAYEAMLSVIQ QLGGQPL+IVSAAADEILAVLKND +KNPDKKKDIEKLLNPIP +
Sbjct: 120  ETRAAYEAMLSVIQNQLGGQPLSIVSAAADEILAVLKNDVVKNPDKKKDIEKLLNPIPGH 179

Query: 181  LFDQLVSIGRLITDFQDA------AAANGGEDALDDDVGVAVXXXXXXXXXXXSDLDIVQ 342
            +FDQLVSIG+LITDFQ+A      ++A  GE+ LDDDVGVAV           SDLDIVQ
Sbjct: 180  VFDQLVSIGKLITDFQEAVDVPNGSSAMDGEEGLDDDVGVAVEFEENEDDDEESDLDIVQ 239

Query: 343  XXXXXXXXXXXVLDNAXXXXXXXXXXXLQEANEGMTLNVQDIDAYWLQRKISQAYEHQID 522
                          +            ++E NEGM LNVQDIDAYWLQRKISQA+E QID
Sbjct: 240  DEEEEDEDVTEPNSSGAMQMGGIDDEDMEEGNEGMGLNVQDIDAYWLQRKISQAFEQQID 299

Query: 523  SQQSQKLAEEVLKILEEGDDHEVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEH 702
             Q  QKLAEEVLKIL EGDD EVE KLL HL+FDKFSLIK+LLRNRLKIVWCTRLARA+ 
Sbjct: 300  PQHCQKLAEEVLKILAEGDDREVENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQD 359

Query: 703  QEQRKTIEGKMMGLAPALAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG---- 870
            QE+R+ IE +M G    L  ILEQLHATRA+AKERQKNLEKSIREEARRLKD++GG    
Sbjct: 360  QEERERIEEEMKG--TELQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTGGDGDK 417

Query: 871  ---XXXXXXXXXXXAENGWLNGQRQLLDLESIVFHQGGLLMANKKCELPLGSYRNNCKGY 1041
                           E+GWL GQRQ+LDL+SI F QGG  MA KKC+LP GSYR+  KGY
Sbjct: 418  ESRDRSRRVVADRDGESGWLKGQRQMLDLDSIAFAQGGFFMAKKKCDLPDGSYRHLSKGY 477

Query: 1042 EEVHVPALKPKPLAADEKLIK 1104
            EE+HVPALK KPL  +EKL+K
Sbjct: 478  EEIHVPALKAKPLDPNEKLVK 498


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