BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019753
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   352   e-161
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   355   e-159
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   344   e-155
ref|NP_001190745.1| transcription initiation factor TFIIH subuni...   345   e-155
ref|NP_974564.1| transcription initiation factor TFIIH subunit H...   345   e-155

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  352 bits (904), Expect(2) = e-161
 Identities = 175/214 (81%), Positives = 197/214 (92%)
 Frame = -2

Query: 643 CFLLHLINSAEAEVTTKSISPSMMKVFQRGLLSQRDREGPRLTESGFQFLLMDTNAQLWY 464
           CFLL LI+S + E  T + S S+MKVFQRGLL+QR++E PRLTESGFQFLLMDTNAQLWY
Sbjct: 149 CFLLQLISSTQTEKLT-NFSSSLMKVFQRGLLTQREKEAPRLTESGFQFLLMDTNAQLWY 207

Query: 463 IVREYISNSEDRGVDSADIISFLLELSFHVTGEAYNMNTLTDIQRTTVKDLADLGLTKIQ 284
           I+REYISNSE+RGVD AD+ISFLLELSFHVTGEAYN+NTLT+ QR T+KDL DLGL K+Q
Sbjct: 208 IMREYISNSEERGVDPADLISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDLGLVKLQ 267

Query: 283 QGRKDSWFIPTKLATNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVE 104
           QGRK+SWFIPTKLATNLS+SLSD SSRKQG+VVVETNFRLYAYS+SKLHCEILRLF+RVE
Sbjct: 268 QGRKESWFIPTKLATNLSMSLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVE 327

Query: 103 YQLPNLIVGSITKENLYKAFSNGITADQIISFLQ 2
           YQLPNLIVG+ITKE+LY AF NGITA+QIISFLQ
Sbjct: 328 YQLPNLIVGAITKESLYNAFENGITAEQIISFLQ 361



 Score =  244 bits (623), Expect(2) = e-161
 Identities = 119/148 (80%), Positives = 131/148 (88%)
 Frame = -3

Query: 1149 MPQVRIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLYIDVHVTA 970
            MPQV+IIAKNFMDMVASLPAMKLD LY N FICEAILRSLPPLAKKY+LQ+LYIDV VTA
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 969  SSLQEWVLIDGASKHRVAVDRLIQLRVFTEIVDRKKEATYRLNPMFQMNLQKHIVQGGVL 790
             +++EWVL DG SKHRVA+DRLIQLRVFTE  DRKKE +YRLNP FQ NLQKH++ GGVL
Sbjct: 61   KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120

Query: 789  PREPMASNITVRLPSLEDLDNYAAQQWE 706
            PREPM SNITVRLPSL+DL+ YA  QWE
Sbjct: 121  PREPMPSNITVRLPSLDDLEAYALGQWE 148


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
           gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
           [Ricinus communis]
          Length = 451

 Score =  355 bits (910), Expect(2) = e-159
 Identities = 173/214 (80%), Positives = 199/214 (92%)
 Frame = -2

Query: 643 CFLLHLINSAEAEVTTKSISPSMMKVFQRGLLSQRDREGPRLTESGFQFLLMDTNAQLWY 464
           CFLLHLINS  AE +T + S SMMK+FQRGLL+QRD+E PRLTESGFQFLLMDTNAQLWY
Sbjct: 149 CFLLHLINSGHAERST-NFSSSMMKIFQRGLLTQRDKEAPRLTESGFQFLLMDTNAQLWY 207

Query: 463 IVREYISNSEDRGVDSADIISFLLELSFHVTGEAYNMNTLTDIQRTTVKDLADLGLTKIQ 284
           I+REYISNSE+RG+DSAD+ISFLLELSFH+TGEAYNM  LT+ QR  +KDLADLGL K+Q
Sbjct: 208 IIREYISNSEERGLDSADLISFLLELSFHITGEAYNMIMLTEFQRNMIKDLADLGLVKLQ 267

Query: 283 QGRKDSWFIPTKLATNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVE 104
           QGRK+SWFIPTKLATNLS+SL+D+SSRKQG+VVVETNFR+YAYSTSKLHCEI+RLF+RVE
Sbjct: 268 QGRKESWFIPTKLATNLSMSLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEIMRLFSRVE 327

Query: 103 YQLPNLIVGSITKENLYKAFSNGITADQIISFLQ 2
           YQLPNL+VG++TKE+LY AF NGITA+QIISFLQ
Sbjct: 328 YQLPNLVVGAMTKESLYSAFENGITAEQIISFLQ 361



 Score =  236 bits (601), Expect(2) = e-159
 Identities = 114/148 (77%), Positives = 130/148 (87%)
 Frame = -3

Query: 1149 MPQVRIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLYIDVHVTA 970
            MPQVRIIAKNFMDMVASLPAMKLDKLY N FIC+AILRSLPPLAKKYV+Q+LYID  V  
Sbjct: 1    MPQVRIIAKNFMDMVASLPAMKLDKLYTNPFICQAILRSLPPLAKKYVVQILYIDGPVAD 60

Query: 969  SSLQEWVLIDGASKHRVAVDRLIQLRVFTEIVDRKKEATYRLNPMFQMNLQKHIVQGGVL 790
             +L+EW+L DG+SKHRVA+DRL QLR+FTEIVDRKKE +Y+LNP FQ NLQKH++ GGVL
Sbjct: 61   KTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVDRKKEISYKLNPTFQTNLQKHLIDGGVL 120

Query: 789  PREPMASNITVRLPSLEDLDNYAAQQWE 706
            P EP+ASNI VRLP+LE+LD YA  QWE
Sbjct: 121  PGEPLASNIAVRLPTLEELDTYALGQWE 148


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  344 bits (883), Expect(2) = e-155
 Identities = 169/214 (78%), Positives = 199/214 (92%)
 Frame = -2

Query: 643 CFLLHLINSAEAEVTTKSISPSMMKVFQRGLLSQRDREGPRLTESGFQFLLMDTNAQLWY 464
           CFLL LINS +AE  + +IS S+MKVFQ+GLLSQRD+E PRLTESGFQFLLM+TNAQLWY
Sbjct: 149 CFLLQLINSGQAEKPS-NISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWY 207

Query: 463 IVREYISNSEDRGVDSADIISFLLELSFHVTGEAYNMNTLTDIQRTTVKDLADLGLTKIQ 284
           I+REYISN+E+RGVD AD+ISFLLELSFHVTGEAY+++TL+D QR  +KDLADLGL K+Q
Sbjct: 208 IIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQ 267

Query: 283 QGRKDSWFIPTKLATNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVE 104
           QGRK+SWFIPTKLATNLS+SL+D+SSRK G+VVVETNFR+YAYSTSKLHCEILRLF+R+E
Sbjct: 268 QGRKESWFIPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIE 327

Query: 103 YQLPNLIVGSITKENLYKAFSNGITADQIISFLQ 2
           YQLPNLIVG+ITKE+LY AF NGITA+QI++FLQ
Sbjct: 328 YQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQ 361



 Score =  232 bits (591), Expect(2) = e-155
 Identities = 116/148 (78%), Positives = 129/148 (87%)
 Frame = -3

Query: 1149 MPQVRIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLYIDVHVTA 970
            MPQV+IIAKNFMDMVASLPAMKLD+LYENAFICEAILRSLPPLAKK+VLQ+LYID  V+A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 969  SSLQEWVLIDGASKHRVAVDRLIQLRVFTEIVDRKKEATYRLNPMFQMNLQKHIVQGGVL 790
             S++EWVL DG SK++VAVDRLIQLRVF E  DRK+E TYRLNP FQ NLQK ++ G VL
Sbjct: 61   KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 789  PREPMASNITVRLPSLEDLDNYAAQQWE 706
             REPM SNITVRLPSLEDL+ YA  QWE
Sbjct: 121  AREPMPSNITVRLPSLEDLEAYALDQWE 148


>ref|NP_001190745.1| transcription initiation factor TFIIH subunit H4 [Arabidopsis
           thaliana] gi|332658440|gb|AEE83840.1| transcription
           initiation factor TFIIH subunit H4 [Arabidopsis
           thaliana]
          Length = 482

 Score =  345 bits (884), Expect(2) = e-155
 Identities = 168/214 (78%), Positives = 195/214 (91%)
 Frame = -2

Query: 643 CFLLHLINSAEAEVTTKSISPSMMKVFQRGLLSQRDREGPRLTESGFQFLLMDTNAQLWY 464
           CFLL LINS + E  T  IS SMMK+FQRGLLSQRD++GPRLTESGFQFLLMDTNAQLWY
Sbjct: 149 CFLLQLINSGQGEKLT-GISSSMMKIFQRGLLSQRDKDGPRLTESGFQFLLMDTNAQLWY 207

Query: 463 IVREYISNSEDRGVDSADIISFLLELSFHVTGEAYNMNTLTDIQRTTVKDLADLGLTKIQ 284
           I+REYI N+E+R VD AD+ISFLLELSFHVTG+AYN+NTLT++Q  T+KDLADLGL K+Q
Sbjct: 208 IIREYILNAEERDVDPADLISFLLELSFHVTGQAYNLNTLTEVQNNTLKDLADLGLVKLQ 267

Query: 283 QGRKDSWFIPTKLATNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVE 104
           QGRKDSWFIPTKLATNLS+SL+D+S+RK+G+VV+ETNFR+YAYSTSKL CEILRLFAR+E
Sbjct: 268 QGRKDSWFIPTKLATNLSVSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILRLFARIE 327

Query: 103 YQLPNLIVGSITKENLYKAFSNGITADQIISFLQ 2
           YQLPNLI  +ITKE+LY AF NGIT+DQII+FLQ
Sbjct: 328 YQLPNLIACAITKESLYNAFDNGITSDQIITFLQ 361



 Score =  230 bits (586), Expect(2) = e-155
 Identities = 110/148 (74%), Positives = 129/148 (87%)
 Frame = -3

Query: 1149 MPQVRIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLYIDVHVTA 970
            MPQV+IIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKKYVLQ+LYIDV V A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 969  SSLQEWVLIDGASKHRVAVDRLIQLRVFTEIVDRKKEATYRLNPMFQMNLQKHIVQGGVL 790
            + ++EWVL DG SKHRVA+DRLIQLR+F+EI DRK+  +Y LNP FQ NLQKHI+ GGVL
Sbjct: 61   TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 789  PREPMASNITVRLPSLEDLDNYAAQQWE 706
            PREPM S+  ++LPSL++L+ YA +QWE
Sbjct: 121  PREPMNSDNAIKLPSLQELETYALKQWE 148


>ref|NP_974564.1| transcription initiation factor TFIIH subunit H4 [Arabidopsis
           thaliana] gi|332658438|gb|AEE83838.1| transcription
           initiation factor TFIIH subunit H4 [Arabidopsis
           thaliana]
          Length = 462

 Score =  345 bits (884), Expect(2) = e-155
 Identities = 168/214 (78%), Positives = 195/214 (91%)
 Frame = -2

Query: 643 CFLLHLINSAEAEVTTKSISPSMMKVFQRGLLSQRDREGPRLTESGFQFLLMDTNAQLWY 464
           CFLL LINS + E  T  IS SMMK+FQRGLLSQRD++GPRLTESGFQFLLMDTNAQLWY
Sbjct: 149 CFLLQLINSGQGEKLT-GISSSMMKIFQRGLLSQRDKDGPRLTESGFQFLLMDTNAQLWY 207

Query: 463 IVREYISNSEDRGVDSADIISFLLELSFHVTGEAYNMNTLTDIQRTTVKDLADLGLTKIQ 284
           I+REYI N+E+R VD AD+ISFLLELSFHVTG+AYN+NTLT++Q  T+KDLADLGL K+Q
Sbjct: 208 IIREYILNAEERDVDPADLISFLLELSFHVTGQAYNLNTLTEVQNNTLKDLADLGLVKLQ 267

Query: 283 QGRKDSWFIPTKLATNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVE 104
           QGRKDSWFIPTKLATNLS+SL+D+S+RK+G+VV+ETNFR+YAYSTSKL CEILRLFAR+E
Sbjct: 268 QGRKDSWFIPTKLATNLSVSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILRLFARIE 327

Query: 103 YQLPNLIVGSITKENLYKAFSNGITADQIISFLQ 2
           YQLPNLI  +ITKE+LY AF NGIT+DQII+FLQ
Sbjct: 328 YQLPNLIACAITKESLYNAFDNGITSDQIITFLQ 361



 Score =  230 bits (586), Expect(2) = e-155
 Identities = 110/148 (74%), Positives = 129/148 (87%)
 Frame = -3

Query: 1149 MPQVRIIAKNFMDMVASLPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLYIDVHVTA 970
            MPQV+IIAKNFMDMVASLPA+KLDKLY N FICEAILRSLPPLAKKYVLQ+LYIDV V A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 969  SSLQEWVLIDGASKHRVAVDRLIQLRVFTEIVDRKKEATYRLNPMFQMNLQKHIVQGGVL 790
            + ++EWVL DG SKHRVA+DRLIQLR+F+EI DRK+  +Y LNP FQ NLQKHI+ GGVL
Sbjct: 61   TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 789  PREPMASNITVRLPSLEDLDNYAAQQWE 706
            PREPM S+  ++LPSL++L+ YA +QWE
Sbjct: 121  PREPMNSDNAIKLPSLQELETYALKQWE 148