BLASTX nr result

ID: Atractylodes21_contig00019741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019741
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284651.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 ...   228   1e-57
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   223   6e-56
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   222   1e-55
gb|ACU22874.1| unknown [Glycine max]                                  221   2e-55
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   221   2e-55

>ref|XP_002284651.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 [Vitis vinifera]
           gi|147795942|emb|CAN60863.1| hypothetical protein
           VITISV_016726 [Vitis vinifera]
          Length = 229

 Score =  228 bits (582), Expect = 1e-57
 Identities = 109/181 (60%), Positives = 133/181 (73%), Gaps = 7/181 (3%)
 Frame = +2

Query: 224 FQESVSS-----SCSVDRNCGTGVFECNICFDLAQDPIVTLCGHLFCWPCLYKWLQFHSY 388
           F ES S      S + + +  TG FECNICF+LAQDPIVTLCGHLFCWPCLY+WL  HS+
Sbjct: 5   FGESTSGPSRGPSYTTNNSNDTGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHIHSH 64

Query: 389 SHECPVCKSFVKEDNLVPIYGRGTSNSDLRAHTSSRDEIPRRPASQRPQTAPAPELSYF- 565
           SHECPVCK+ V+E+ LVP+YGRG + SD R+ +     IP RPA QRP+ AP P++++F 
Sbjct: 65  SHECPVCKALVQEEKLVPLYGRGKTPSDPRSRSVPGINIPNRPAGQRPEVAPRPDVNHFP 124

Query: 566 RQDGFGAQGGFVPMATARLGNLTRTAFFGA-IPSLLNFHVHGFHDATAYGLPTGVPYLFS 742
              G+G  GGF+PMA+AR GNLT +A FG  IPSLLN HVHGFHDAT YG  +G PY FS
Sbjct: 125 PPQGYGFMGGFMPMASARFGNLTLSAAFGGLIPSLLNLHVHGFHDATVYGTTSGFPYGFS 184

Query: 743 S 745
           +
Sbjct: 185 N 185


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  223 bits (568), Expect = 6e-56
 Identities = 119/211 (56%), Positives = 136/211 (64%), Gaps = 10/211 (4%)
 Frame = +2

Query: 221 GFQESVS------SSCSVDRNCGTGVFECNICFDLAQDPIVTLCGHLFCWPCLYKWLQFH 382
           GF ES S      S  S + N   G FECNICFDLAQDPIVTLCGHLFCWPCLYKWL FH
Sbjct: 4   GFGESTSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFH 63

Query: 383 SYSHECPVCKSFVKEDNLVPIYGRGTSNSDLRAHTSSRDEIPRRPASQRPQTAPAPELSY 562
           S S ECPVCK+ V+E+ LVP+YGRG +++D R+ +     IP RPA QRP+TAP PE ++
Sbjct: 64  SKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNH 123

Query: 563 FRQDGF---GAQGGFVPMATARLGNLTRTAFFGA-IPSLLNFHVHGFHDATAYGLPTGVP 730
           F Q GF   G  GGF PMATARLGN T +A FG  IPSL N  VHGF DA  YG P G P
Sbjct: 124 FGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYG-PAGYP 182

Query: 731 YLFSSXXXXXXXXXXXXXPIHGQAAKSVFLK 823
           Y F+S               HGQ  +  +LK
Sbjct: 183 YGFNSFHGGHPHGYRQH---HGQGQQDYYLK 210


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  222 bits (565), Expect = 1e-55
 Identities = 116/211 (54%), Positives = 135/211 (63%), Gaps = 10/211 (4%)
 Frame = +2

Query: 221 GFQESVSSS-----CSVDRNCGTGVFECNICFDLAQDPIVTLCGHLFCWPCLYKWLQFHS 385
           GF ES S S      + + N   G FECNICFDLAQDPI+TLCGHLFCWPCLYKWL FHS
Sbjct: 4   GFGESTSRSPPSPSYAGNNNSDAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHS 63

Query: 386 YSHECPVCKSFVKEDNLVPIYGRGTSNSDLRAHTSSRDEIPRRPASQRPQTAPAPELSYF 565
            S ECPVCK+ V+E+ LVP+YGRG ++SD R+ +     IP RPA QRP+TAP PE + F
Sbjct: 64  QSRECPVCKALVEEEKLVPLYGRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPPEPNPF 123

Query: 566 RQDGF---GAQGGFVPMATARLGNLTRTAFFGA-IPSLLNFHVHGFHDATAYGLPTGVPY 733
              GF   G  GGF P ATAR GN T +A FG  IPSL NF +HGFH AT YG   G PY
Sbjct: 124 AHHGFGFTGGLGGFAPAATARFGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGAPGFPY 183

Query: 734 LFSSXXXXXXXXXXXXXPIH-GQAAKSVFLK 823
            FS+             P+H GQ  +  +LK
Sbjct: 184 GFSN---SFHGGHVHRYPLHTGQGQQDYYLK 211


>gb|ACU22874.1| unknown [Glycine max]
          Length = 205

 Score =  221 bits (564), Expect = 2e-55
 Identities = 108/183 (59%), Positives = 127/183 (69%), Gaps = 9/183 (4%)
 Frame = +2

Query: 221 GFQESV-----SSSCSVDRNCGTGVFECNICFDLAQDPIVTLCGHLFCWPCLYKWLQFHS 385
           GF ES      S SCS + +   G FECNICFDLAQDP++TLCGHLFCWPCLY+WL  HS
Sbjct: 4   GFGESTRASAPSPSCSGNSSNDAGDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHS 63

Query: 386 YSHECPVCKSFVKEDNLVPIYGRGTSNSDLRAHTSSRDEIPRRPASQRPQTA---PAPEL 556
           +S ECPVCK+ V+E+ LVP+YGRG + +D R  +    EIP RP+ Q PQTA   P PE 
Sbjct: 64  HSQECPVCKALVQEEKLVPLYGRGKTQTDPRTKSYPGMEIPHRPSGQGPQTAPPPPPPEA 123

Query: 557 SYFRQDGFGAQGGFVPMATARLGNLT-RTAFFGAIPSLLNFHVHGFHDATAYGLPTGVPY 733
           + F   GFG  GGF+PMATAR GN T  TAF G IPSLLN H HGF DAT YG  +G P+
Sbjct: 124 NPFGSYGFGLMGGFIPMATARFGNFTLSTAFGGFIPSLLNIHFHGFQDATVYGTTSGYPF 183

Query: 734 LFS 742
            F+
Sbjct: 184 GFN 186


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  221 bits (563), Expect = 2e-55
 Identities = 106/165 (64%), Positives = 120/165 (72%), Gaps = 4/165 (2%)
 Frame = +2

Query: 263 NCGTGVFECNICFDLAQDPIVTLCGHLFCWPCLYKWLQFHSYSHECPVCKSFVKEDNLVP 442
           N   G FECNICFDLAQDPIVTLCGHLFCWPCLYKWL FHS S ECPVCK+ V+E+ LVP
Sbjct: 24  NGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSQSKECPVCKALVEEEKLVP 83

Query: 443 IYGRGTSNSDLRAHTSSRDEIPRRPASQRPQTAPAPELSYFRQDGF---GAQGGFVPMAT 613
           +YGRG +++D R+ +     IP RPA QRP+TAP PE ++F Q GF   G  GGF PMAT
Sbjct: 84  LYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQHGFGFMGGLGGFAPMAT 143

Query: 614 ARLGNLTRTAFFGA-IPSLLNFHVHGFHDATAYGLPTGVPYLFSS 745
           AR GN T +A FG  IPSL N  VHGF DA  YG  TG PY FS+
Sbjct: 144 ARFGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGFPYGFSN 188


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