BLASTX nr result

ID: Atractylodes21_contig00019724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019724
         (1815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent...   417   e-114
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent...   397   e-108
ref|XP_002315356.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ...   380   e-103
ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicag...   363   1e-97

>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
            [Cucumis sativus] gi|449517699|ref|XP_004165882.1|
            PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase
            prp5-like [Cucumis sativus]
          Length = 562

 Score =  417 bits (1071), Expect = e-114
 Identities = 229/524 (43%), Positives = 325/524 (62%), Gaps = 13/524 (2%)
 Frame = -1

Query: 1659 VSNRIAAIIXXXXXXXXXXXRMCQGMCFSLPTLEDPFNDKPMIHDSXXXXXXXXXXKIRP 1480
            VS R+A+II           R CQGMCFSLPT +DP+ND+    D+          +   
Sbjct: 30   VSARVASIIAAKKRRMSGKRRQCQGMCFSLPTPDDPYNDRNGKKDTKVKPSKSSKREFPK 89

Query: 1479 SKGVD----NLSEKGSDTSQNKRKANVDHQSNGKDQEQKRARVEKDSTPSDKEGSKK-LS 1315
             K        L +   + +++ ++ +     +G+  ++ +   E+     + +GS +   
Sbjct: 90   EKSTSAPNGTLRDVCFENARSSKEGSGGTLPSGRVAKRSKTDPERTKEYGNAKGSVQGFQ 149

Query: 1314 GHISEGEGCPSNFLISCLKTIQDMMHHYEAFEPGKPLFFDSWGFEFWRCYSNGRNVLETS 1135
               SE    PS FLI CL  I++ ++H       KPLF D+WG EFW+CYS+G+++L+TS
Sbjct: 150  EEDSESSVAPSKFLILCLSAIENALYHDSIKSINKPLFADTWGIEFWKCYSSGKDILDTS 209

Query: 1134 GGCSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFLLFLVPSQEKATEVRAVCKPLKAFGI 955
            G  ST E+IAW+VS+A D+I +KEKEG SF+SPFLLFLVP+QEKAT++R++CKPLKA G+
Sbjct: 210  GLSSTDEKIAWVVSSAADSIARKEKEGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGV 269

Query: 954  HTVSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLELVSMEAIDISGVCSLIVDGLESSSG 775
            HTVS+HPGAS+ HQI GLK+CEPEFLV TP+RLLELV+M+AIDISGV  L+VDGLES S 
Sbjct: 270  HTVSIHPGASLGHQIQGLKSCEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSR 329

Query: 774  DAYLDSIKSIRQCISVDPHTVVFCSDLSKACLPTVSSLLPSPVCRLSREDFFVNKSAGII 595
              YLD  +SIR+ IS   HT+VF    S A +P + SLL  P+ RLS       +SA II
Sbjct: 330  GGYLDMTQSIRKSISSKLHTIVFSDSFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACII 389

Query: 594  QSIDVVGSAEEKLQKGLQVLHEVFSDPFVPGPSKLTFVVGKDDNREELVSAIRSKGYSI- 418
            QSI+   S +EKL K +Q L         P P K+ F++GK+ N  +L +A++ KG+ I 
Sbjct: 390  QSINFYTSEKEKLSKVIQALDRANGSQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIV 449

Query: 417  --SVTGGPEVVNREK-----EGTVSVMDLEDTEDADLSQVEVVIIYNFDIAIDEYKKILT 259
              ++ G PE+ N  K        V+  D+E     DL   E + I +    ID+Y +ILT
Sbjct: 450  AGALCGVPEIKNNLKVDGKLRPVVAKTDIEQINTIDLGTYESIFILSAFPPIDKYVEILT 509

Query: 258  GMARYTIKGRLHVILTREDATIAASLAQVLQQCGQQAPESLKQL 127
            GMAR+T  G LH  +++E+A++A SL ++L+QCGQ  P++++ L
Sbjct: 510  GMARHTNNGVLHSFISKEEASVAGSLVEILEQCGQDVPKTVRNL 553


>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
            [Glycine max]
          Length = 563

 Score =  397 bits (1021), Expect = e-108
 Identities = 227/560 (40%), Positives = 329/560 (58%), Gaps = 23/560 (4%)
 Frame = -1

Query: 1737 MPKGEDAIIXXXXXXXXXXXXXXXXKVSNRIAAIIXXXXXXXXXXXRMCQGMCFSLPTLE 1558
            M KGEDA+I                 VS ++AA+I           RMCQGMCFSLPTL+
Sbjct: 1    MAKGEDALIRKKNKKLRKKNSSGSSSVSAKVAAVIAAKKRRKAGKRRMCQGMCFSLPTLD 60

Query: 1557 DPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDNLSEKGSDTSQNKRKAN-VDHQSNGKDQE 1381
            DPFND+    ++            +P   +D+L+ K +D  +       +  + N   +E
Sbjct: 61   DPFNDRGGKEETKTKGPKKKSHS-KPKDKMDHLNGKSADGKKGAVGGRKIARELNDLQRE 119

Query: 1380 QKRARVEKDSTP-----SDKE-----------GSKKLSGHISEGEGCPSNFLISCLKTIQ 1249
             +      + T      S+++           G+K+    ISE    PS F+  CL +I+
Sbjct: 120  NESVTASNNLTHKCIINSERKNIDMTEMAHLCGTKQRDCDISE---FPSKFIFWCLSSIE 176

Query: 1248 DMMHHYEAFEPGK--PLFFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTI 1075
            + + H +A+  G+    F + WG EF +CYS G++++ETSG  +T EQIAW+VS A DT 
Sbjct: 177  NALRHGDAYTDGEGNSFFLNPWGLEFLKCYSTGKDLIETSGTSATAEQIAWMVSGAADTF 236

Query: 1074 TKKEKEGVSFTSPFLLFLVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKT 895
             +KEKEG+SF  PFLLFLVPSQEK+T+VR VCKPLK+ GIHTVS+HPGAS+DHQI GLKT
Sbjct: 237  VRKEKEGLSFPGPFLLFLVPSQEKSTQVRTVCKPLKSVGIHTVSIHPGASLDHQIQGLKT 296

Query: 894  CEPEFLVCTPDRLLELVSMEAIDISGVCSLIVDGLESSSGDAYLDSIKSIRQCISVDPHT 715
            CEPEFLV TP+RLLELVS +AIDISGV  L++DGL +     + D++KSI+ CIS +P  
Sbjct: 297  CEPEFLVSTPERLLELVSTKAIDISGVSMLVIDGLNTICSAGHADTVKSIKNCISGNPRV 356

Query: 714  VVFCSDLSKACLPTVSSLLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQKGLQVL 535
            V+F   +S   +P V  LL   +CR+S  +   + S+ IIQS++V  S E+K+   ++ L
Sbjct: 357  VIFNDCVSHMSIPMVRYLLTGSICRVSLNNSINSLSSYIIQSVEVCTSEEDKVVMSIEAL 416

Query: 534  HEVFSDPFVPGPSKLTFVVGKDDNREELVSAIRSKGYSISVTGGPEVVN----REKEGTV 367
             +  S+      S + +++ KD    +LV  ++SKGYS+S+      +N     ++   V
Sbjct: 417  DQFQSNS--TQNSNMLYILSKDVKCHKLVKTLKSKGYSVSLDSDAANINDRVDSDRRAAV 474

Query: 366  SVMDLEDTEDADLSQVEVVIIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAA 187
            S++DL      D+   +VV++ +F  +ID Y  ILT MAR ++ G LH  LT+ D  +AA
Sbjct: 475  SLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFLTKRDTELAA 534

Query: 186  SLAQVLQQCGQQAPESLKQL 127
             L  VL+QCGQ+ P++L+ L
Sbjct: 535  PLIAVLEQCGQEVPQTLQDL 554


>ref|XP_002315356.1| predicted protein [Populus trichocarpa] gi|222864396|gb|EEF01527.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  380 bits (977), Expect = e-103
 Identities = 231/543 (42%), Positives = 306/543 (56%), Gaps = 6/543 (1%)
 Frame = -1

Query: 1737 MPKGEDAIIXXXXXXXXXXXXXXXXKVSNRIAAIIXXXXXXXXXXXRMCQGMCFSLPTLE 1558
            M KG+DA+                  VS R+A+II           RMCQGMCFSLPTL+
Sbjct: 1    MAKGDDAVAKKKNKERRKKMQKEGSSVSARVASIIAAKKRRLSGKRRMCQGMCFSLPTLD 60

Query: 1557 DPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDNLSEKGSDTSQNKRKANVDHQSNGKDQEQ 1378
            DPFND+                                               NGK + Q
Sbjct: 61   DPFNDR-----------------------------------------------NGKLEFQ 73

Query: 1377 KRARVEKDSTPSDKEGSKKLSGHISEGEGCPSNFLISCLKTIQDMMHHYEAF--EPGKPL 1204
            K+   E  + PS ++  K  +    E   CPS FL+  L  I+  + H   +  +  + L
Sbjct: 74   KK---ETKNKPSARKNEKAFA---RENMDCPSKFLMYSLNEIEKALRHEGTYNDDEDESL 127

Query: 1203 FFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFLLF 1024
            F   WG EF +CYS G+++LETSG   T EQIAW+VS A D I +KE+E +S  SP  LF
Sbjct: 128  FVSPWGVEFLKCYSTGKDILETSGSSCTTEQIAWVVSMAADIIVRKEEEDLSVPSPSFLF 187

Query: 1023 LVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLELV 844
            LVPSQE+A +VR VCKPLKA GIHTVS+HPG+SIDHQIHGL +CEPEFLV TPDRLLELV
Sbjct: 188  LVPSQEEAVKVRMVCKPLKALGIHTVSVHPGSSIDHQIHGLASCEPEFLVSTPDRLLELV 247

Query: 843  SMEAIDISGVCSLIVDGLESSSGDAYLDSIKSIRQCISVDPHTVVFCSDLSKACLPTVSS 664
            S++AIDISGV  L+VDG+ES      L+++KSIRQ IS    TVVF +  S AC+P + +
Sbjct: 248  SLKAIDISGVSFLVVDGVESLYNGGCLNALKSIRQSISGSLRTVVFNNFFSGACVPVLQN 307

Query: 663  LLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQK--GLQVLHEVFSDPFVPGPSKL 490
            LL   +CRLS +     +SA I+Q+I++  S EE+L K    Q L   F          +
Sbjct: 308  LLLGSICRLSIDQSIPIQSACIVQTINLCTSEEERLLKVCTSQYLDNCF--------LLV 359

Query: 489  TFVVGKDDNREELVSAIRSKGYSISVTGGPEVVNREK--EGTVSVMDLEDTEDADLSQVE 316
             +VVG D++   LV  +   GY++SV     + N +   +  VSV+++E     +L+  E
Sbjct: 360  LYVVGNDNSSFNLVKMLEINGYTVSVESNRSISNDDNRMKPVVSVINVERISTTNLAFYE 419

Query: 315  VVIIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAASLAQVLQQCGQQAPESL 136
             VI+ NF  +ID Y +ILT MAR++IKG  H  LT+EDA IA  L  +L+QCGQ  PE+L
Sbjct: 420  TVILPNFGPSIDNYVQILTRMARHSIKGNFHSFLTKEDALIARPLMGILEQCGQAVPEAL 479

Query: 135  KQL 127
            + L
Sbjct: 480  RNL 482


>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 493

 Score =  380 bits (976), Expect = e-103
 Identities = 228/516 (44%), Positives = 302/516 (58%), Gaps = 5/516 (0%)
 Frame = -1

Query: 1659 VSNRIAAIIXXXXXXXXXXXRMCQGMCFSLPTLEDPFNDKPMIHDSXXXXXXXXXXKIRP 1480
            VS R+A+II           RMCQGMCFSLPTL+DPFN++    D               
Sbjct: 28   VSARVASIIAAKKRRLSGKRRMCQGMCFSLPTLDDPFNERHGRMDI-------------- 73

Query: 1479 SKGVDNLSEKGSDTSQNKRKANVDH--QSNGKDQEQKRARVEKDSTPSDKEGSKKLSGHI 1306
                 N+ +K       K+K N     Q NG D   +    +                  
Sbjct: 74   -----NVKDK-------KKKVNTREKVQLNGNDLNHQEQACD-----------------Y 104

Query: 1305 SEGEGCPSNFLISCLKTIQDMMHHYEAF-EPGKPLFFDSWGFEFWRCYSNGRNVLETSGG 1129
            S+G   PS F I CL  I+  + H   + +  KPL  + WG EF +  S G+++LETSG 
Sbjct: 105  SDG---PSKFFILCLNAIEKALRHDGTYNDEEKPLLVNPWGLEFLKFCSIGKDILETSGS 161

Query: 1128 CSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFLLFLVPSQEKATEVRAVCKPLKAFGIHT 949
              T+EQIAWIVS A D I +KEKEG+SF+SPFLLFLVPSQEKA +VR VCKPLK  G+HT
Sbjct: 162  SCTIEQIAWIVSIAADAIARKEKEGLSFSSPFLLFLVPSQEKAAKVRMVCKPLKDLGVHT 221

Query: 948  VSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLELVSMEAIDISGVCSLIVDGLESSSGDA 769
            VSLH GAS+DHQI GLK+CEPEFLV TP+RL+EL+S++AIDI+GV  L+VDGL+S   D 
Sbjct: 222  VSLHAGASLDHQIRGLKSCEPEFLVSTPERLMELISLKAIDITGVSFLVVDGLDSLYQDG 281

Query: 768  YLDSIKSIRQCISVDPHTVVFCSDLSKACLPTVSSLLPSPVCRLSREDFFVNKSAGIIQS 589
             L S+KSIRQ IS +PHTV F +  + AC+P + +L    + RLS  D   ++SA I Q+
Sbjct: 282  SLGSLKSIRQSISGNPHTVAFNNLFNHACVPALQNLFVGSINRLSLSDSICSQSACIFQT 341

Query: 588  IDVVGSAEEKLQKGLQVLHEVFSDPFVPGPSKLTFVVGKDDNREELVSAIRSKGYSISVT 409
            I+V  S ++KL K     H +          KL F+V  +     LV  ++S GYS+S  
Sbjct: 342  IEVCTSEQKKLSK--LCSHRL----------KLLFIVENNKKAASLVKILKSNGYSVSTE 389

Query: 408  GGPEV--VNREKEGTVSVMDLEDTEDADLSQVEVVIIYNFDIAIDEYKKILTGMARYTIK 235
               EV  V+   +  VSV++ E    ADL   E++I+ NF ++ID Y +ILT MAR+T  
Sbjct: 390  SNCEVSNVDTRMKPVVSVINAEHISTADLGVYEIIILPNFVLSIDNYIQILTRMARHTTH 449

Query: 234  GRLHVILTREDATIAASLAQVLQQCGQQAPESLKQL 127
            G LH  +T EDA +A  L ++L+QCGQ  PE+L+ L
Sbjct: 450  GILHSFMTEEDALLAGPLIEILEQCGQAVPETLRTL 485


>ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 532

 Score =  363 bits (931), Expect = 1e-97
 Identities = 204/544 (37%), Positives = 308/544 (56%), Gaps = 7/544 (1%)
 Frame = -1

Query: 1737 MPKGEDAIIXXXXXXXXXXXXXXXXKVSNRIAAIIXXXXXXXXXXXRMCQGMCFSLPTLE 1558
            M KG+D+++                 VS +IAA+I           R+C+GMCFSLP+L+
Sbjct: 1    MAKGDDSVLKKHNKKLRKKQNSKNS-VSAKIAAVIASKKRRKAGKRRICEGMCFSLPSLD 59

Query: 1557 DPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDNLSEKGSDTSQNKRKANVDHQSNGKDQEQ 1378
            DPFND+                     +G     +K      + +K             +
Sbjct: 60   DPFNDR---------------------QGKPEFKKKDPKKKTSSQKEKTTPVKGKSVPGE 98

Query: 1377 KRARVEKDSTPSDKEGSKKLSG--HISEGEGCPSNFLISCLKTIQDMMHHYEAFEPGK-- 1210
            K   V ++   +  E  +   G  H +E    PS F+  CL  I++ + H +A+  G+  
Sbjct: 99   KGTAVGRNGANNKSEMVEVCCGEQHDNEVSDFPSKFVFWCLSAIENALRHDDAYTDGEGN 158

Query: 1209 PLFFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFL 1030
              F + WG EF + +S G+++++T G  +T EQIAW+VS A D   +KEK+G+S  +PFL
Sbjct: 159  SFFLNPWGLEFSKHFSTGKDLIDTGGTFATTEQIAWMVSAAADIFVRKEKQGLSLDTPFL 218

Query: 1029 LFLVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLE 850
            LFLVPS++KA +VR VCKPLK+ GIHTVS+HPGAS+DHQI GLK+CEPEFL+ TP+RLLE
Sbjct: 219  LFLVPSEKKAGQVRTVCKPLKSVGIHTVSVHPGASLDHQIQGLKSCEPEFLISTPERLLE 278

Query: 849  LVSMEAIDISGVCSLIVDGLESSSGDAYLDSIKSIRQCISVDPHTVVFCSDLSKACLPTV 670
            LVS++AIDISG+  L++DG ++     + D+IKSI++ IS +P  VVF    +   +P V
Sbjct: 279  LVSLKAIDISGISMLVIDGFDAICKAGHADAIKSIKKFISGNPSLVVFNDSFNHTSIPVV 338

Query: 669  SSLLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQKGLQVLHEVFSDPFVPGPSKL 490
              LL  P+CR+S  +   + S+ I+QS+ V  S E+KL K ++VL +  S       S L
Sbjct: 339  RHLLTGPICRISINNSIASLSSCIVQSVQVCTSDEDKLVKSIEVLRQFRSSQ--THSSNL 396

Query: 489  TFVVGKDDNREELVSAIRSKGYSISVTGGPEVVNREKEGT---VSVMDLEDTEDADLSQV 319
             +++ KD    +LV  ++S G S S+      +N   +     V+++DLED    D+   
Sbjct: 397  LYILRKDVKCHKLVKTLKSMGCSTSLDSDAATINDSVDSNRRLVTMIDLEDISTLDIGMY 456

Query: 318  EVVIIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAASLAQVLQQCGQQAPES 139
            +V+++ +   ++D Y+ ILT MAR ++ G LH  LT+ D   A  L  +L+QCGQ+ PE+
Sbjct: 457  DVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFLTKSDTEHAGPLISILEQCGQEVPET 516

Query: 138  LKQL 127
            LK L
Sbjct: 517  LKDL 520


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