BLASTX nr result

ID: Atractylodes21_contig00019722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019722
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   129   1e-27
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   129   1e-27
ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   127   3e-27
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...   126   7e-27
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   124   3e-26

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  129 bits (324), Expect = 1e-27
 Identities = 68/151 (45%), Positives = 84/151 (55%)
 Frame = +1

Query: 67  MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXXKRRAYAXXXXXXX 246
           M +PQ P+   H Y  ALQ+++YQA                      KRRA +       
Sbjct: 1   MGLPQTPTPT-HLYPEALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRA-STSSSTAP 58

Query: 247 XXXXXFNYATSFLPLPHVTXXXXXXXXXXPKVVFDEDLKAKDSVCCVCLGEFEMNEELIQ 426
                 N A SFL                P ++FD++LKA+DS+CCVCLGEFE+ EEL Q
Sbjct: 59  ILPSSMNQAASFLSPSCEIGLKGELKGKLPTILFDDELKARDSLCCVCLGEFEIKEELHQ 118

Query: 427 VPSCKHVFHKDCIHHWLQSNSTCPLCRCCVF 519
           VPSCKHVFH DCI+HWL++NSTCPLCRC VF
Sbjct: 119 VPSCKHVFHADCIYHWLRTNSTCPLCRCSVF 149


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  129 bits (323), Expect = 1e-27
 Identities = 75/187 (40%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
 Frame = +1

Query: 67  MSVPQ----PPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXXKRRAYAXXX 234
           MS+PQ    PP    H Y   LQ+++YQ                       KRRA +   
Sbjct: 1   MSLPQTATSPPP---HLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRASSLSS 57

Query: 235 XXXXXXXXXFNYAT--SFLPLPHVTXXXXXXXXXXPKVVFDEDLKAKDSVCCVCLGEFEM 408
                     N  T  S +P P             P+++FDEDL A+DS+CCVCLGEFE+
Sbjct: 58  TPHLLPRTIANPPTTSSHIPQPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFEL 117

Query: 409 NEELIQVPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAVGPISGPPPLQPNIREAHLSG 588
            EEL+Q+P CKHVFH +CIHHWLQSNSTCPLCRC +      ++  PP+  NI    +S 
Sbjct: 118 KEELVQIPYCKHVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPI--NI----IST 171

Query: 589 DGPATEG 609
           D P   G
Sbjct: 172 DPPQQHG 178


>ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 206

 Score =  127 bits (320), Expect = 3e-27
 Identities = 66/166 (39%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
 Frame = +1

Query: 67  MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXXKRRAYAXXXXXXX 246
           M VPQPP  + H Y   +Q+++YQA                      KRRA +       
Sbjct: 1   MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLH 60

Query: 247 XXXXXFNYATSFLPLPHVTXXXXXXXXXX---PKVVFDEDLKAKDSVCCVCLGEFEMNEE 417
                 N  T++ P P                P+++FDEDL+  DSVCCVCLGEFE+ EE
Sbjct: 61  ILPSTTNSQTTY-PYPSQPCRLDLAVQFLDKLPRILFDEDLRTGDSVCCVCLGEFELKEE 119

Query: 418 LIQVPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAVGPISGPPPL 555
           L+Q+P CKHVFH  CI +WLQSNSTCPLCRC +  +   ++  PP+
Sbjct: 120 LLQIPYCKHVFHISCISNWLQSNSTCPLCRCSIIPSTKFLNPAPPI 165


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score =  126 bits (317), Expect = 7e-27
 Identities = 71/172 (41%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
 Frame = +1

Query: 67  MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXXKRRAYAXXXXXXX 246
           M  P   S N H Y  ALQ+++YQA                      KRRA +       
Sbjct: 1   MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQV 60

Query: 247 XXXXXFNYATSFLPLPHVTXXXXXXXXXXPKVVFDEDLKAKDSVCCVCLGEFEMNEELIQ 426
                 N A   LP               P V+FDEDLK ++S CCVCLGEFEM EEL+Q
Sbjct: 61  LPTSS-NQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGEFEMKEELLQ 119

Query: 427 VPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAV----------GPISGPPP 552
           +PSCKHVFH +CIHHWL SN+TCPLCR  V +            GP + PPP
Sbjct: 120 IPSCKHVFHIECIHHWLHSNTTCPLCRSFVIIPTTKLDNQDQSGGPDTSPPP 171


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score =  124 bits (311), Expect = 3e-26
 Identities = 64/166 (38%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
 Frame = +1

Query: 67  MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXXKRRAYAXXXXXXX 246
           M VPQPP  + H Y   +Q+++YQA                      KRRA +       
Sbjct: 1   MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLH 60

Query: 247 XXXXXFNYATSFLPL---PHVTXXXXXXXXXXPKVVFDEDLKAKDSVCCVCLGEFEMNEE 417
                     +  P    P             P+++FDEDL+ +DSVCCVCLGEFE+NEE
Sbjct: 61  ILPSTSTDPQTAYPYSTQPCRLDLTVQFLDKLPRILFDEDLRTRDSVCCVCLGEFELNEE 120

Query: 418 LIQVPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAVGPISGPPPL 555
           L+Q+P C HVFH  CI +WLQSNSTCPLCRC +  +   ++  PP+
Sbjct: 121 LLQIPYCNHVFHISCICNWLQSNSTCPLCRCSIIPSSKFLNPAPPI 166


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